RNA–Protein interactions for RNA: ENST00000444498.5

NME4-205, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 3

Gene NME4, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-205ENST00000444498 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.55■□□□□ 0.48e-17■■■■■ 69.3
NME4-205ENST00000444498 MRPL46Q9H2W6 279 aaKnown RBP17.55■□□□□ 0.4
NME4-205ENST00000444498 EPB41L4BQ9H329 900 aa17.55■□□□□ 0.4
NME4-205ENST00000444498 PRM3Q9NNZ6 103 aa17.55■□□□□ 0.4
NME4-205ENST00000444498 DMRT3Q9NQL9 472 aa17.55■□□□□ 0.4
NME4-205ENST00000444498 KCMF1Q9P0J7 381 aa17.55■□□□□ 0.4
NME4-205ENST00000444498 CLDN16Q9Y5I7 305 aa17.55■□□□□ 0.4
NME4-205ENST00000444498 CPAMD8Q8IZJ3 1885 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 SYNDIG1LA6NDD5 238 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 SMIM24O75264 130 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 F10P00742 488 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 MYBL2P10244 700 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 HIST1H1TP22492 207 aaPredicted RBP17.54■□□□□ 0.4
NME4-205ENST00000444498 SLC13A2Q13183 592 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 MRPL49Q13405 166 aaKnown RBP17.54■□□□□ 0.4
NME4-205ENST00000444498 DDX39BQ13838 428 aaKnown RBP17.54■□□□□ 0.4
NME4-205ENST00000444498 TERF2Q15554 542 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 INAQ16352 499 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 AP5B1Q2VPB7 878 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 FCRLBQ6BAA4 426 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 CRLF3Q8IUI8 442 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 BEST3Q8N1M1 668 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 TMEM151AQ8N4L1 468 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 CSF3RQ99062 836 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 MTERF1Q99551 399 aaKnown RBP17.54■□□□□ 0.4
NME4-205ENST00000444498 NPAS2Q99743 824 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 OR51B5Q9H339 312 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 ABI3Q9P2A4 366 aa17.54■□□□□ 0.4
NME4-205ENST00000444498 TGFBR3LH3BV60 316 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 RTCAO00442 366 aaKnown RBP17.53■□□□□ 0.4
NME4-205ENST00000444498 OR7A17O14581 309 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 CTNSO60931 367 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 SH3BGRLO75368 114 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 SSR2P43308 183 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 ARFIP1P53367 373 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 PHEXP78562 749 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 CPSF6Q16630 551 aaKnown RBP eCLIP17.53■□□□□ 0.4
NME4-205ENST00000444498 FHL5Q5TD97 284 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 FAM180AQ6UWF9 173 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 LCA5Q86VQ0 697 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 GSPT2Q8IYD1 628 aaKnown RBP17.53■□□□□ 0.4
NME4-205ENST00000444498 RNF175Q8N4F7 328 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 KIF2BQ8N4N8 673 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 SUN3Q8TAQ9 357 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 FAR1Q8WVX9 515 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 RGMAQ96B86 450 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 CENPKQ9BS16 269 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 NTMT1Q9BV86 223 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 NOL11Q9H8H0 719 aaKnown RBP17.53■□□□□ 0.4
NME4-205ENST00000444498 PSD3Q9NYI0 1048 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 PCTPQ9UKL6 214 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 PPIEQ9UNP9 301 aaKnown RBP17.53■□□□□ 0.4
NME4-205ENST00000444498 RNF11Q9Y3C5 154 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 ESPL1Q14674 2120 aa17.53■□□□□ 0.4
NME4-205ENST00000444498 IQANK1A0A1B0GTG1 560 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 BLACEA4D250 179 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 ANKUB1A6NFN9 424 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 A8MUA0 341 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 SAP18O00422 153 aaKnown RBP17.52■□□□□ 0.4
NME4-205ENST00000444498 CDK2AP1O14519 115 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 MAN1A2O60476 641 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 PRAMEF2O60811 474 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 MYO1DO94832 1006 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 CLDN9O95484 217 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 SBK3P0C264 359 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 PTX3P26022 381 aaPredicted RBP17.52■□□□□ 0.4
NME4-205ENST00000444498 CCNG1P51959 295 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 OR4C11Q6IEV9 310 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 RPS19BP1Q86WX3 136 aaKnown RBP17.52■□□□□ 0.4
NME4-205ENST00000444498 BCORP1Q8N888 145 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 ST6GALNAC3Q8NDV1 305 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 B3GNT7Q8NFL0 401 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 OR52B6Q8NGF0 335 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 WDR20Q8TBZ3 569 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 ATP6V1E2Q96A05 226 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 MAPKAP1Q9BPZ7 522 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 ADAP2Q9NPF8 381 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 PNO1Q9NRX1 252 aaKnown RBP17.52■□□□□ 0.4
NME4-205ENST00000444498 PSMC3IPQ9P2W1 217 aaPredicted RBP17.52■□□□□ 0.4
NME4-205ENST00000444498 SPACA6W5XKT8 324 aa17.52■□□□□ 0.4
NME4-205ENST00000444498 LRRK2Q5S007 2527 aa17.52■□□□□ 0.39
NME4-205ENST00000444498 FOXE1O00358 373 aaPredicted RBP17.51■□□□□ 0.39
NME4-205ENST00000444498 PLPP1O14494 284 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 RPS17P08708 135 aaKnown RBP17.51■□□□□ 0.39
NME4-205ENST00000444498 TNFRSF8P28908 595 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 CD96P40200 585 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 RAP1GDS1P52306 607 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 RPS13P62277 151 aaKnown RBP17.51■□□□□ 0.39
NME4-205ENST00000444498 CUL3Q13618 768 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 TUBA3CQ13748 450 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 ZRSR2Q15696 482 aaKnown RBP17.51■□□□□ 0.39
NME4-205ENST00000444498 EIF2S3LQ2VIR3 472 aaKnown RBP17.51■□□□□ 0.39
NME4-205ENST00000444498 TEX35Q5T0J7 233 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 TUBA3EQ6PEY2 450 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 CLNKQ7Z7G1 428 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 ARMC10Q8N2F6 343 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 ZCCHC7Q8N3Z6 543 aaKnown RBP17.51■□□□□ 0.39
NME4-205ENST00000444498 APCDD1LQ8NCL9 501 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 ACMSDQ8TDX5 336 aa17.51■□□□□ 0.39
NME4-205ENST00000444498 NSUN5Q96P11 429 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms