RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 NARFQ9UHQ1 456 aa2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 PILRAQ9UKJ1 303 aa2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 GAB2Q9UQC2 676 aa2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 RNF115Q9Y4L5 304 aa2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 ANGPTL3Q9Y5C1 460 aa2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 U3KQV3 271 aa2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 GREB1LQ9C091 1923 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P9-201ENST00000429856 A0A087WZY1 265 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SH3PXD2BA1X283 911 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZNF732B4DXR9 585 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 H0YCG3 227 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 BLOC1S5-TXNDC5H3BN57 136 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 MCF2LO15068 1137 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 TEX28O15482 410 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 GAS8O95995 478 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 RAF1P04049 648 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 PROS1P07225 676 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 HMBSP08397 361 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 FRMD6-AS1P0C7T7 363 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 PDHBP11177 359 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 GP1BBP13224 206 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 PRG2P13727 222 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 RBMS1P29558 406 aaKnown RBP2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 ADSSP30520 456 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SFTPDP35247 375 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SOX6P35712 828 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 MAGEA11P43364 429 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 NSFP46459 744 aaKnown RBP2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 CLCN4P51793 760 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 BTG1P62324 171 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SLC3A1Q07837 685 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SCGB2A2Q13296 93 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 STX1AQ16623 288 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SHROOM1Q2M3G4 852 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZNF528Q3MIS6 628 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 CMPK2Q5EBM0 449 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 LIPKQ5VXJ0 399 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 UGT3A1Q6NUS8 523 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 DHRS11Q6UWP2 260 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 LPCAT2Q7L5N7 544 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SLC16A9Q7RTY1 509 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 COX8CQ7Z4L0 72 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 WDR49Q8IV35 697 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 FAM133AQ8N9E0 248 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 ZNF383Q8NA42 475 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 PPFIBP2Q8ND30 876 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 GPRC5AQ8NFJ5 357 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 TRIM58Q8NG06 486 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 FAM76AQ8TAV0 307 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SLC5A11Q8WWX8 675 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SEPT8Q92599 483 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 GLYATL1Q969I3 302 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 MCHR2Q969V1 340 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 ULK4Q96C45 1275 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 C4orf45Q96LM5 186 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 GPR137Q96N19 417 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 F2RL3Q96RI0 385 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 NUSAP1Q9BXS6 441 aaKnown RBP2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 TMEM231Q9H6L2 316 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 CALHM2Q9HA72 323 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 DDX28Q9NUL7 540 aaKnown RBP2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 MIS18AQ9NYP9 233 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 EXTL2Q9UBQ6 330 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 SLC7A7Q9UM01 511 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 NCKAP1Q9Y2A7 1128 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 ETV7Q9Y603 341 aa2.62□□□□□ -1.99
HMGB1P9-201ENST00000429856 A0A1B0GWJ7 208 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 ATP6AP2A0A1C7CYW4 349 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 CLRN2A0PK11 232 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 SNURFLB1AK76 121 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 SMIM1B2RUZ4 78 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 M0R296 226 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 PALMO75781 387 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 PIGNO95427 931 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 CPNE6O95741 557 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 TSHBP01222 138 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 MT-ND2P03891 347 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 OPN1MWP04001 364 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 KRT6BP04259 564 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 RNF224P0DH78 156 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 OPN1MW2P0DN77 364 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 OPN1MW3P0DN78 364 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 IGHV4-38-2P0DP08 117 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 CYP3A5P20815 502 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 DRD5P21918 477 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 HNRNPA2B1P22626 353 aaKnown RBP2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 IL4RP24394 825 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 ALDH4A1P30038 563 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 PRDX2P32119 198 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 CSTF2P33240 577 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 TAGLN2P37802 199 aaKnown RBP2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 KRT6CP48668 564 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 LBX1P52954 281 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 MTTPP55157 894 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 MAZP56270 477 aaKnown RBP2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 OR1D5P58170 312 aa2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 LINC01547P58512 204 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 MRPL28Q13084 256 aaKnown RBP2.61□□□□□ -1.99
HMGB1P9-201ENST00000429856 PDZK1IP1Q13113 114 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms