RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 NIPA2Q8N8Q9 360 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GALNT11Q8NCW6 608 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF461Q8TAF7 563 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 PXYLP1Q8TE99 480 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 SHISA4Q96DD7 197 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 CDKN2AIPNLQ96HQ2 116 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 PGAM5Q96HS1 289 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 NECTIN4Q96NY8 510 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 TGM7Q96PF1 710 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ALPK1Q96QP1 1244 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 C8orf33Q9H7E9 229 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 CXorf21Q9HAI6 301 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 MOV10Q9HCE1 1003 aaKnown RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 FZD3Q9NPG1 666 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 TUBA8Q9NY65 449 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 COL2A1P02458 1487 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 CHD4Q14839 1912 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 BORCS7-ASMTA0A0B4J1R7 106 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 A0A0G2JPF8 293 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 HNRNPCL3B7ZW38 293 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 H7C417 338 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ANKRD28O15084 1053 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 OPN1SWP03999 348 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 HNRNPCL4P0DMR1 293 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 HLA-EP13747 358 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GRIA2P42262 883 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 DPP6P42658 865 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 RCAN2Q14206 197 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 MELKQ14680 651 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ASTE1Q2TB18 679 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 FBXO43Q4G163 708 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 MFSD5Q6N075 450 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 NCEH1Q6PIU2 408 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ASPGQ86U10 573 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 IL4I1Q96RQ9 567 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 TSSK6Q9BXA6 273 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GPR174Q9BXC1 333 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 FAM120CQ9NX05 1096 aaKnown RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 MKLN1Q9UL63 735 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 CA14Q9ULX7 337 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GJE1A6NN92 205 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ABCB7O75027 752 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ATE1O95260 518 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 HAPLN1P10915 354 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 EDNRBP24530 442 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GDF10P55107 478 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 OGFOD2Q6N063 350 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 HSPA12BQ96MM6 686 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 FUZQ9BT04 418 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 TMEM109Q9BVC6 243 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 OR51I1Q9H343 314 aa8.62□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF701Q9NV72 531 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-208ENST00000428599 GGT3PA6NGU5 568 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 C11orf98E9PRG8 122 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 DLDP09622 509 aaKnown RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CD36P16671 472 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF12P17014 697 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CBLP22681 906 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 RPS13P62277 151 aaKnown RBP8.61□□□□□ -1.03
CTNND1-208ENST00000428599 TRAM2Q15035 370 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 AGTRAPQ6RW13 159 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 C17orf99Q6UX52 265 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 DCAF4L2Q8NA75 395 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 OR8S1Q8NH09 359 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 C22orf15Q8WYQ4 148 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 BADQ92934 168 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 HSPBAP1Q96EW2 488 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 IGSF21Q96ID5 467 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 HSD3B7Q9H2F3 369 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 MYNNQ9NPC7 610 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 GPRC5BQ9NZH0 403 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 OR51F1A6NGY5 319 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 H3BSH0 61 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CH25HO95992 272 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 IFNA1P01562 189 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 PGCP20142 388 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 OTX2P32243 289 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ANKRD26P1Q6NSI1 321 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 SNX29P2Q8IUI4 249 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 BBS10Q8TAM1 723 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 KCNK13Q9HB14 408 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 SIX4Q9UIU6 781 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CDH10Q9Y6N8 788 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 UBR2Q8IWV8 1755 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 TSPAN6O43657 245 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 DIRAS3O95661 229 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 IQCF3P0C7M6 154 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 JUNDP17535 347 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 GRIA1P42261 906 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ID2Q02363 134 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 VMACQ2NL98 169 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 PLEKHG7Q6ZR37 379 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 GOLGA7Q7Z5G4 137 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 CPNE8Q86YQ8 564 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 UBQLNLQ8IYU4 475 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ANKK1Q8NFD2 765 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 ADAMTS18Q8TE60 1221 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 SLC35F5Q8WV83 523 aa8.61□□□□□ -1.03
CTNND1-208ENST00000428599 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms