RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TAPBPLQ9BX59 468 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 LRRC3Q9BY71 257 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ATXN7L1Q9ULK2 861 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-204ENST00000427724 WBP11Q9Y2W2 641 aaKnown RBP10.21□□□□□ -0.77
TCOF1-204ENST00000427724 A0A1W2PP18 115 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 DCDC2BA2VCK2 349 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 GPR39O43194 453 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 SERPINB7O75635 380 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 SEMA3DO95025 777 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 SNAP29O95721 258 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ARRB2P32121 409 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 FOLR3P41439 243 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 NCBP2P52298 156 aaKnown RBP eCLIP10.21□□□□□ -0.771e-8■■□□□ 13.6
TCOF1-204ENST00000427724 BLVRAP53004 296 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 NNATQ16517 81 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 CYP27C1Q4G0S4 372 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 DENND5AQ6IQ26 1287 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ASPGQ86U10 573 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 LILRA2Q8N149 483 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 AADATQ8N5Z0 425 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 MFSD2AQ8NA29 543 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 NELL1Q92832 810 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 IL17CQ9P0M4 197 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 DNAJC15Q9Y5T4 150 aa10.21□□□□□ -0.77
TCOF1-204ENST00000427724 ZNF318Q5VUA4 2279 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 FAM25AB3EWG3 89 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 FAM25CB3EWG5 89 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 FAM25GB3EWG6 89 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 C9P02748 559 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 HBQ1P09105 142 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 GABRG2P18507 467 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 GABRB3P28472 473 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 CTSCP53634 463 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 EMP2P54851 167 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 ARG2P78540 354 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 PMS2P3Q13401 168 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 PTPRRQ15256 657 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 CEP78Q5JTW2 689 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 C1orf52Q8N6N3 182 aaKnown RBP10.21□□□□□ -0.78
TCOF1-204ENST00000427724 IPCEF1Q8WWN9 437 aaPredicted RBP10.21□□□□□ -0.78
TCOF1-204ENST00000427724 KCNJ9Q92806 393 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 TMBIM1Q969X1 311 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 ITCHQ96J02 903 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 CAMK1GQ96NX5 476 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 MEAF6Q9HAF1 191 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 THSD1Q9NS62 852 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 SMOXQ9NWM0 555 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 RIMS3Q9UJD0 308 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 PDE10AQ9Y233 779 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 NOTCH2Q04721 2471 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 HHLA1C9JL84 531 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 PPP6CO00743 305 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 GJB3O75712 270 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 PDGFBP01127 241 aaPredicted RBP10.21□□□□□ -0.78
TCOF1-204ENST00000427724 CD9P21926 228 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 SLC6A2P23975 617 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 LEPRP48357 1165 aaKnown RBP10.21□□□□□ -0.78
TCOF1-204ENST00000427724 SH3BP2P78314 561 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 SF3A2Q15428 464 aaKnown RBP10.21□□□□□ -0.78
TCOF1-204ENST00000427724 NKAIN2Q5VXU1 208 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 SMYD5Q6GMV2 418 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 SLC45A3Q96JT2 553 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 MUC13Q9H3R2 512 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 CD320Q9NPF0 282 aa10.21□□□□□ -0.78
TCOF1-204ENST00000427724 COL24A1Q17RW2 1714 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 GNB5O14775 395 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ANGPTL1O95841 491 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 IL7RP16871 459 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 OPRD1P41143 372 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 NFKB2Q00653 900 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 TOP3AQ13472 1001 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 HLA-BQ31612 363 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 RFLNAQ6ZTI6 216 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 P2RY8Q86VZ1 359 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 SNX29P2Q8IUI4 249 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 NLGN4XQ8N0W4 816 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 FAM110BQ8TC76 370 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 TM9SF3Q9HD45 589 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 STARD5Q9NSY2 213 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 GMPR2Q9P2T1 348 aaKnown RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 FZD4Q9ULV1 537 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 SPEF1Q9Y4P9 236 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 FEZF1A0PJY2 475 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 FAM234BA2RU67 622 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 KRBA1A5PL33 1030 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 LOC730098B7Z3J9 87 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 NME4O00746 187 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CLEC3AO75596 197 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CPNE6O95741 557 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 S1PR4O95977 384 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 AZGP1P25311 298 aaKnown RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 PTX3P26022 381 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CNR2P34972 360 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CDKN1CP49918 316 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 C1DQ13901 141 aaKnown RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 DAG1Q14118 895 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 SMU1Q2TAY7 513 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 TCTE1Q5JU00 501 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 FRG2Q64ET8 278 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms