RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ANKRD11Q6UB99 2663 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-209ENST00000425836 PSMD12O00232 456 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-209ENST00000425836 TMPRSS11DO60235 418 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 B4GALT2O60909 372 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 CDC123O75794 336 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-209ENST00000425836 SNUPNO95149 360 aaKnown RBP23.07■■□□□ 1.28
VEGFA-209ENST00000425836 CHEK2O96017 543 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 GBAP04062 536 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 KLK1P06870 262 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 HEXBP07686 556 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 MMP11P24347 488 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 TUBB8Q3ZCM7 444 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 MRM1Q6IN84 353 aaKnown RBP23.07■■□□□ 1.28
VEGFA-209ENST00000425836 RNF165Q6ZSG1 346 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 COMMD6Q7Z4G1 85 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 PPP1R32Q7Z5V6 425 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 TRIM42Q8IWZ5 723 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 HOMEZQ8IX15 550 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 ZNF781Q8N8C0 355 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 ILKAPQ9H0C8 392 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-209ENST00000425836 ADAM29Q9UKF5 820 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-209ENST00000425836 RAP2CQ9Y3L5 183 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 CCL27Q9Y4X3 112 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 SCN3AQ9NY46 2000 aa23.07■■□□□ 1.28
VEGFA-209ENST00000425836 CYR61O00622 381 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 DYNC1I1O14576 645 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 NR1D1P20393 614 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 COL28A1Q2UY09 1125 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 MFSD4BQ5TF39 518 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 ATG16L1Q676U5 607 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 PAGE2Q7Z2X7 111 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 RAB43Q86YS6 212 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 C1orf52Q8N6N3 182 aaKnown RBP23.06■■□□□ 1.28
VEGFA-209ENST00000425836 TWIST2Q8WVJ9 160 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 NACC2Q96BF6 587 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 CSF3RQ99062 836 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 FBXW2Q9UKT8 454 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 SNNO75324 88 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-209ENST00000425836 IGHEP01854 428 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 JAK1P23458 1154 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 TPP2P29144 1249 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-209ENST00000425836 RHAGQ02094 409 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 IMPG1Q17R60 797 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 HSP90B2PQ58FF3 399 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 FAM47BQ8NA70 645 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 ADAMTS18Q8TE60 1221 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 ZNF75CPQ92670 426 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-209ENST00000425836 APIPQ96GX9 242 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 MESP1Q9BRJ9 268 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 THAP1Q9NVV9 213 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 HAO1Q9UJM8 370 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 ASB4Q9Y574 426 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 HS3ST3B1Q9Y662 390 aa23.06■■□□□ 1.28
VEGFA-209ENST00000425836 ZZEF1O43149 2961 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 SLC28A1O00337 649 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 FAM58BPP0C7Q3 252 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 LINC00032P0C843 101 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 HNRNPFP52597 415 aaKnown RBP23.05■■□□□ 1.28
VEGFA-209ENST00000425836 HNRNPH2P55795 449 aaKnown RBP23.05■■□□□ 1.28
VEGFA-209ENST00000425836 BTKQ06187 659 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 CYP20A1Q6UW02 462 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 Q6ZSR9 355 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 MRGPREQ86SM8 312 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 GPR180Q86V85 440 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 TMEM52Q8NDY8 209 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 PLPP5Q8NEB5 264 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 THAP4Q8WY91 577 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 MED4Q9NPJ6 270 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 INTS9Q9NV88 658 aaKnown RBP23.05■■□□□ 1.28
VEGFA-209ENST00000425836 ATG4BQ9Y4P1 393 aa23.05■■□□□ 1.28
VEGFA-209ENST00000425836 SOCS6O14544 535 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 KLF11O14901 512 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 PIP5K1BO14986 540 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 ALOX12BO75342 701 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 CYC1P08574 325 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 RPL14P50914 215 aaKnown RBP23.04■■□□□ 1.28
VEGFA-209ENST00000425836 BTG2P78543 158 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 DEFB109BQ30KR1 87 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 SPIN4Q56A73 249 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 SPDYAQ5MJ70 313 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 CCNYL2Q5T2Q4 361 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 FAAH2Q6GMR7 532 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 OR2T11Q8NH01 316 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 C11orf24Q96F05 449 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-209ENST00000425836 LYARQ9NX58 379 aaKnown RBP23.04■■□□□ 1.28
VEGFA-209ENST00000425836 POLHQ9Y253 713 aa23.04■■□□□ 1.28
VEGFA-209ENST00000425836 RSL1D1O76021 490 aaKnown RBP23.03■■□□□ 1.28
VEGFA-209ENST00000425836 CPN2P22792 545 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 ACSM2AQ08AH3 577 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 ATP1A4Q13733 1029 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 ACSM2BQ68CK6 577 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 TMEM205Q6UW68 189 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 KIRREL2Q6UWL6 708 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 QSOX2Q6ZRP7 698 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 DDIASQ8IXT1 998 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 EFCAB3Q8N7B9 438 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 CATSPER2Q96P56 530 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 IP6K3Q96PC2 410 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 P4HTMQ9NXG6 502 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms