RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 PITHD1Q9GZP4 211 aaPredicted RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 REXO4Q9GZR2 422 aaKnown RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 TP63Q9H3D4 680 aaPredicted RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 RHOJQ9H4E5 214 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 CNOT10Q9H9A5 744 aaKnown RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 GPRC5BQ9NZH0 403 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 KCMF1Q9P0J7 381 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 RNF14Q9UBS8 474 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 ZNF223Q9UK11 482 aaPredicted RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 CLCA3PQ9Y6N3 262 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 NCKAP5O14513 1909 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 LRIT2A6NDA9 550 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 TP73O15350 636 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 CLEC3AO75596 197 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 ZFAND5O76080 213 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 CERS1P27544 350 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 CASQ1P31415 396 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 RPL21P46778 160 aaKnown RBP15.03■□□□□ -0
COL18A1-205ENST00000423214 HNRNPFP52597 415 aaKnown RBP15.03■□□□□ -0
COL18A1-205ENST00000423214 TLE4Q04727 773 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 TGM3Q08188 693 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 ILF2Q12905 390 aaKnown RBP15.03■□□□□ -0
COL18A1-205ENST00000423214 BMPR2Q13873 1038 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 FASTKD3Q14CZ7 662 aaKnown RBP15.03■□□□□ -0
COL18A1-205ENST00000423214 PAOXQ6QHF9 649 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 SYT10Q6XYQ8 523 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 CAPN12Q6ZSI9 719 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 CDH24Q86UP0 819 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 GPALPP1Q8IXQ4 340 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 TMEM132CQ8N3T6 1108 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 SNX31Q8N9S9 440 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 ANKRD49Q8WVL7 239 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 ASB5Q8WWX0 329 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 DAZLQ92904 295 aaKnown RBP15.03■□□□□ -0
COL18A1-205ENST00000423214 SERINC2Q96SA4 455 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 DNAJC11Q9NVH1 559 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 TXNDC16Q9P2K2 825 aa15.03■□□□□ -0
COL18A1-205ENST00000423214 PPIEQ9UNP9 301 aaKnown RBP15.03■□□□□ -0
COL18A1-205ENST00000423214 FREM3P0C091 2139 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 FAM90A27PA6NNH2 459 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 TGFBR3LH3BV60 316 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 OR2J2O76002 312 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 PDE9AO76083 593 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 CAPN3P20807 821 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 MTTPP55157 894 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 RIPPLY3P57055 190 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 C2orf54Q08AI8 447 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 IL20RBQ6UXL0 311 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 TMEM52Q8NDY8 209 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 SPATA4Q8NEY3 305 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 TSPAN17Q96FV3 270 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 QRFPRQ96P65 431 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 CSF3RQ99062 836 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 TMEM79Q9BSE2 394 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 DERL2Q9GZP9 239 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 ENKD1Q9H0I2 346 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 DPH5Q9H2P9 285 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 EHD1Q9H4M9 534 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 NT5DC2Q9H857 520 aa15.02■□□□□ -0
COL18A1-205ENST00000423214 FAM166BA8MTA8 275 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 PRKNO60260 465 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-205ENST00000423214 S100BP04271 92 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-205ENST00000423214 CHRNB4P30926 498 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 SOX3P41225 446 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 HSPA7P48741 367 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 LIM2P55344 173 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 POU4F1Q01851 419 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 STX4Q12846 297 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 EFTUD2Q15029 972 aaKnown RBP eCLIP15.01□□□□□ -0.011e-7■■■■■ 28.1
COL18A1-205ENST00000423214 PDK4Q16654 411 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 ADPRMQ3LIE5 342 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 XKR6Q5GH73 641 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 HSDL2Q6YN16 418 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 GK5Q6ZS86 529 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 GPSM1Q86YR5 675 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 ZBED8Q8IZ13 594 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 OR2M7Q8NG81 312 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 OR52N2Q8NGI0 321 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 OR14A16Q8NHC5 309 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 SREK1Q8WXA9 508 aaKnown RBP15.01□□□□□ -0.01
COL18A1-205ENST00000423214 RND1Q92730 232 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 CDKL2Q92772 493 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 EXT2Q93063 718 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 PTCD3Q96EY7 689 aaKnown RBP15.01□□□□□ -0.01
COL18A1-205ENST00000423214 EFCAB11Q9BUY7 163 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 CAB39LQ9H9S4 337 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 LIN28AQ9H9Z2 209 aaKnown RBP15.01□□□□□ -0.01
COL18A1-205ENST00000423214 MCCC2Q9HCC0 563 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 MOCS1Q9NZB8 636 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 DAPP1Q9UN19 280 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 SPACA6W5XKT8 324 aa15.01□□□□□ -0.01
COL18A1-205ENST00000423214 EXPH5Q8NEV8 1989 aa15□□□□□ -0.01
COL18A1-205ENST00000423214 HIVEP1P15822 2718 aa15□□□□□ -0.01
COL18A1-205ENST00000423214 WWP2O00308 870 aa15□□□□□ -0.01
COL18A1-205ENST00000423214 RAD51CO43502 376 aa15□□□□□ -0.01
COL18A1-205ENST00000423214 OR6B1O95007 311 aa15□□□□□ -0.01
COL18A1-205ENST00000423214 CCDC166P0CW27 439 aa15□□□□□ -0.01
COL18A1-205ENST00000423214 KCNC1P48547 511 aa15□□□□□ -0.01
COL18A1-205ENST00000423214 ETF1P62495 437 aaKnown RBP15□□□□□ -0.01
COL18A1-205ENST00000423214 PPIAP62937 165 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms