RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 CWH43Q9H720 699 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 ZNF556Q9HAH1 456 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 FZD3Q9NPG1 666 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 ISYNA1Q9NPH2 558 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 RASSF1Q9NS23 344 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 IMPAD1Q9NX62 359 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 ELOVL2Q9NXB9 296 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 KCTD5Q9NXV2 234 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 AGO1Q9UL18 857 aaKnown RBP6.72□□□□□ -1.33
TVP23C-202ENST00000419890 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.72□□□□□ -1.33
TVP23C-202ENST00000419890 DUSP12Q9UNI6 340 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 ASB4Q9Y574 426 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 PCDHB7Q9Y5E2 793 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 TIMM13Q9Y5L4 95 aaPredicted RBP6.72□□□□□ -1.33
TVP23C-202ENST00000419890 PTPRSQ13332 1948 aa6.72□□□□□ -1.33
TVP23C-202ENST00000419890 CHD9Q3L8U1 2897 aa6.71□□□□□ -1.33
TVP23C-202ENST00000419890 TTC3P53804 2025 aa6.71□□□□□ -1.33
TVP23C-202ENST00000419890 CXorf51AA0A1B0GTR3 108 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 IRGMA1A4Y4 181 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 LINC01553A4QN01 128 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CASTOR2A6NHX0 329 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 PRR19A6NJB7 356 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ZAR1LA6NP61 321 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 A8MU76 341 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 B8ZZF3 427 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 hCG_2039718K7EN88 272 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 TNFRSF11BO00300 401 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 FPGTO14772 594 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 SYN3O14994 580 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 SHOXO15266 292 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 FZD6O60353 706 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CYP7B1O75881 506 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 B3GAT3O94766 335 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CCNB2O95067 398 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 OAZ2O95190 189 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 WISP1O95388 367 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 IFNA14P01570 189 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ZDHHC11BP0C7U3 371 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 PRSS56P0CW18 603 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 MPC1LP0DKB6 136 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 MYCLP1P12525 358 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 AMD1P17707 334 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ENGP17813 658 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 DDX5P17844 614 aaKnown RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CFL1P23528 166 aaKnown RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 PSMA1P25786 263 aaKnown RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 C21orf33P30042 268 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CSTF2P33240 577 aaKnown RBP eCLIP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 TGFBR1P36897 503 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ACVRL1P37023 503 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 RPL3P39023 403 aaKnown RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 IL12RB1P42701 662 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 MAPK8P45983 427 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 LIMS1P48059 325 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 SLC6A12P48065 614 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 RFX2P48378 723 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 GZMKP49863 264 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 AP1S2P56377 157 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 AP1S1P61966 158 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 SELENOWP63302 87 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 HTRA4P83105 476 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 HMGCS1Q01581 520 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 IL1RL1Q01638 556 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ST3GAL4Q11206 333 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 HYAL2Q12891 473 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 PPP1R8Q12972 351 aaKnown RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 NCF4Q15080 339 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CCDC85BQ15834 202 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 MICAQ29983 383 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 GLYR1Q49A26 553 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 FBXO48Q5FWF7 155 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 GPRC6AQ5T6X5 926 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 LIPJQ5W064 366 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 PLAG1Q6DJT9 500 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ZNF782Q6ZMW2 699 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CCDC149Q6ZUS6 474 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ZNF551Q7Z340 670 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CDH24Q86UP0 819 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 C10orf111Q8N326 155 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ZBTB2Q8N680 514 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 PNPLA1Q8N8W4 532 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 GALNT11Q8NCW6 608 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 VPS37AQ8NEZ2 397 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 LPCAT1Q8NF37 534 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 GOT1L1Q8NHS2 421 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 SELENOMQ8WWX9 145 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 GEMIN6Q8WXD5 167 aaKnown RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ASB15Q8WXK1 588 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 LINC01599Q8WXQ3 324 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 OVCA2Q8WZ82 227 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 AP3S1Q92572 193 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 ESAMQ96AP7 390 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 AP2M1Q96CW1 435 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 PANX1Q96RD7 426 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 MCCC1Q96RQ3 725 aaPredicted RBP6.71□□□□□ -1.34
TVP23C-202ENST00000419890 COQ7Q99807 217 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CHCHD6Q9BRQ6 235 aa6.71□□□□□ -1.34
TVP23C-202ENST00000419890 CCM2Q9BSQ5 444 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms