RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 MLLT10P55197 1068 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 SKP1P63208 163 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ACSM2AQ08AH3 577 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 SF3A3Q12874 501 aaKnown RBP eCLIP12.89□□□□□ -0.356e-31■■□□□ 14.3
CPNE1-209ENST00000415920 CUL3Q13618 768 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 HERC3Q15034 1050 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 FAM214AQ32MH5 1076 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ADPRMQ3LIE5 342 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 UGT3A2Q3SY77 523 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 TMEM35AQ53FP2 167 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 LACTB2Q53H82 288 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 VWA5B1Q5TIE3 1220 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 YOD1Q5VVQ6 348 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 GARNL3Q5VVW2 1013 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ACSM2BQ68CK6 577 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 RNF165Q6ZSG1 346 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 NUDT13Q86X67 352 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 HOMEZQ8IX15 550 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 C1orf52Q8N6N3 182 aaKnown RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 OR9A4Q8NGU2 314 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 MIB2Q96AX9 1013 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 RGMAQ96B86 450 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 CHMP6Q96FZ7 201 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 KCNC2Q96PR1 638 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ZPBPQ9BS86 351 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 EBPLQ9BY08 206 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 NMRK1Q9NWW6 199 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 VTI1BQ9UEU0 232 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 PPT2Q9UMR5 302 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 NAALAD2Q9Y3Q0 740 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 KCNMB2Q9Y691 235 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 MAU2Q9Y6X3 613 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ARHGAP10A1A4S6 786 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 BLACEA4D250 179 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 DIAPH2O60879 1101 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 PDGFAP04085 211 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 HBQ1P09105 142 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 FBLP22087 321 aaKnown RBP12.88□□□□□ -0.35
CPNE1-209ENST00000415920 DLSTP36957 453 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 OLR1P78380 273 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 BTN3A2P78410 334 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 ATP6AP1LQ52LC2 224 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 SPIN4Q56A73 249 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 DEPDC1Q5TB30 811 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 RHBDD2Q6NTF9 364 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 COMMD6Q7Z4G1 85 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 TRIM46Q7Z4K8 759 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 ARHGEF39Q8N4T4 335 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 GALNT6Q8NCL4 622 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
CPNE1-209ENST00000415920 CDC26Q8NHZ8 85 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 PROKR1Q8TCW9 393 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 MMABQ96EY8 250 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-209ENST00000415920 C3orf30Q96M34 536 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 PSMG3-AS1Q96PY0 264 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 MEAF6Q9HAF1 191 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 LRTM1Q9HBL6 345 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
CPNE1-209ENST00000415920 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-209ENST00000415920 A0A0G2JND7 137 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 SERTM1A2A2V5 107 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 SGK494L7N484 410 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 SDHDO14521 159 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 LSM1O15116 133 aaKnown RBP12.87□□□□□ -0.35
CPNE1-209ENST00000415920 B3GALT2O43825 422 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 PCDH7O60245 1069 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 GALR3O60755 368 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-209ENST00000415920 PEX11AO75192 247 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 DNAJB5O75953 348 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 NSA2O95478 260 aaKnown RBP12.87□□□□□ -0.35
CPNE1-209ENST00000415920 GBAP04062 536 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 EPHA3P29320 983 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 TIA1P31483 386 aaKnown RBP eCLIP12.87□□□□□ -0.353e-12■■■■■ 63.1
CPNE1-209ENST00000415920 GCGRP47871 477 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 SEC24CP53992 1094 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 EMP3P54852 163 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 AQP5P55064 265 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 ERV3-1Q14264 604 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 NXNQ6DKJ4 435 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 ABHD17CQ6PCB6 329 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 ZNF793Q6ZN11 406 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 METTL4Q8N3J2 472 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 FAM26EQ8N5C1 309 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 ESX1Q8N693 406 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 FNDC5Q8NAU1 212 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 RFWD2Q8NHY2 731 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-209ENST00000415920 MVB12AQ96EY5 273 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 APIPQ96GX9 242 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 PPP3R2Q96LZ3 170 aa12.87□□□□□ -0.35
CPNE1-209ENST00000415920 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms