RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 TMEM38AQ9H6F2 299 aa11.14□□□□□ -0.63
RBM28-202ENST00000415472 EPS8L2Q9H6S3 715 aa11.14□□□□□ -0.63
RBM28-202ENST00000415472 THSD1Q9NS62 852 aa11.14□□□□□ -0.63
RBM28-202ENST00000415472 ATAD3AQ9NVI7 634 aa11.14□□□□□ -0.63
RBM28-202ENST00000415472 CUEDC1Q9NWM3 386 aaPredicted RBP11.14□□□□□ -0.63
RBM28-202ENST00000415472 ASF1AQ9Y294 204 aa11.14□□□□□ -0.63
RBM28-202ENST00000415472 IRAK3Q9Y616 596 aa11.14□□□□□ -0.63
RBM28-202ENST00000415472 USP34Q70CQ2 3546 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 CLCA1A8K7I4 914 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 PLPP1O14494 284 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 ZSCAN9O15535 394 aaPredicted RBP11.13□□□□□ -0.63
RBM28-202ENST00000415472 AIREO43918 545 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 GASTP01350 101 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 SRPRAP08240 638 aaKnown RBP11.13□□□□□ -0.63
RBM28-202ENST00000415472 IGFBP1P08833 259 aaPredicted RBP11.13□□□□□ -0.63
RBM28-202ENST00000415472 CDH3P22223 829 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 LIM2P55344 173 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 LEXMQ3ZCV2 418 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 CRB2Q5IJ48 1285 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 TMIGD1Q6UXZ0 262 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 CCDC80Q76M96 950 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 WDR53Q7Z5U6 358 aaPredicted RBP11.13□□□□□ -0.63
RBM28-202ENST00000415472 FAM129CQ86XR2 697 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 CACUL1Q86Y37 369 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 SLC44A2Q8IWA5 706 aaPredicted RBP11.13□□□□□ -0.63
RBM28-202ENST00000415472 OXR1Q8N573 874 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 ANKRD53Q8N9V6 530 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 RAB8BQ92930 207 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
RBM28-202ENST00000415472 OR51E2Q9H255 320 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 OR52A5Q9H2C5 316 aa11.13□□□□□ -0.63
RBM28-202ENST00000415472 TRBV4-1A0A0J9YWV2 114 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 FEZF1A0PJY2 475 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 CLDN24A6NM45 220 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PSMD11O00231 422 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 TLL1O43897 1013 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 LZTS3O60299 673 aaPredicted RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 ADORA3P0DMS8 318 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ARAFP10398 606 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ADRB3P13945 408 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PORP16435 677 aaPredicted RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 CTNNB1P35222 781 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 RXRGP48443 463 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ST8SIA6P61647 398 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ELP6Q0PNE2 266 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ST3GAL4Q11206 333 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 GAB4Q2WGN9 574 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 INAVAQ3KP66 663 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 FNDC3BQ53EP0 1204 aaKnown RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 PRAMEF14Q5SWL7 426 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PRAMEF13Q5VWM6 474 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 HIST2H2AA3Q6FI13 130 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 TRIM40Q6P9F5 258 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 WASH2PQ6VEQ5 465 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 DSG4Q86SJ6 1040 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ZNF605Q86T29 641 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 SLC9B2Q86UD5 537 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 RBM45Q8IUH3 476 aaKnown RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 PLD3Q8IV08 490 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 CACTIN-AS1Q8N1I8 211 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 HORMAD2Q8N7B1 307 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 AMER3Q8N944 861 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ZNF557Q8N988 423 aaPredicted RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 AQP11Q8NBQ7 271 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 SPPL3Q8TCT6 385 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PIP5K1AQ99755 562 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 LGR4Q9BXB1 951 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 DSN1Q9H410 356 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PLCXD1Q9NUJ7 323 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 MS4A12Q9NXJ0 267 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 LOC100506127A0A0U1RQW1 187 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 DSCR3O14972 297 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PPM1DO15297 605 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 MRPS14O60783 128 aaKnown RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 ANXA8P13928 327 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 CBLP22681 906 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 TGM1P22735 817 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ITGB7P26010 798 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PTGER1P34995 402 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 GJA8P48165 433 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 CLK1P49759 484 aaKnown RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 RAB15P59190 212 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 RBBP4Q09028 425 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 CNTN1Q12860 1018 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 PTGES3Q15185 160 aaKnown RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 TBCEQ15813 527 aaPredicted RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 OLIG3Q7RTU3 272 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 LSRQ86X29 649 aaPredicted RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 C12orf76Q8N812 135 aaPredicted RBP11.12□□□□□ -0.63
RBM28-202ENST00000415472 B3GNT7Q8NFL0 401 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 GPR32P1Q8NGA4 272 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 OR2L2Q8NH16 312 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 MCFD2Q8NI22 146 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 HCAR2Q8TDS4 363 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 SLC38A5Q8WUX1 472 aa11.12□□□□□ -0.63
RBM28-202ENST00000415472 APOBEC4Q8WW27 367 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms