RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 TSSK6Q9BXA6 273 aa15.68■□□□□ 0.1
PHTF1-205ENST00000393357 MIXL1Q9H2W2 232 aa15.68■□□□□ 0.1
PHTF1-205ENST00000393357 FBXO44Q9H4M3 255 aa15.68■□□□□ 0.1
PHTF1-205ENST00000393357 ATP6V1HQ9UI12 483 aa15.68■□□□□ 0.1
PHTF1-205ENST00000393357 GRIP1Q9Y3R0 1128 aa15.68■□□□□ 0.1
PHTF1-205ENST00000393357 PCDHGB2Q9Y5G2 931 aa15.68■□□□□ 0.1
PHTF1-205ENST00000393357 GLYATL1P3A0A0U1RQE8 302 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 E7EQ34 232 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 PRRG1O14668 218 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 NME6O75414 186 aaPredicted RBP15.67■□□□□ 0.1
PHTF1-205ENST00000393357 MAP2K3P46734 347 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 YBEYP58557 167 aaPredicted RBP15.67■□□□□ 0.1
PHTF1-205ENST00000393357 RPS25P62851 125 aaKnown RBP15.67■□□□□ 0.1
PHTF1-205ENST00000393357 TARDBPQ13148 414 aaKnown RBP eCLIP15.67■□□□□ 0.1
PHTF1-205ENST00000393357 TUSC3Q13454 348 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 MICAQ29983 383 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 FBXO43Q4G163 708 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 CD300LGQ6UXG3 332 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 TPGS1Q6ZTW0 290 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 TRIM46Q7Z4K8 759 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 C11orf96Q7Z7L8 435 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 SERPINA11Q86U17 422 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 RIT1Q92963 219 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 SIGLEC11Q96RL6 698 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 ING3Q9NXR8 418 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 ERVW-1Q9UQF0 538 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 TNS1Q9HBL0 1735 aaKnown RBP15.67■□□□□ 0.1
PHTF1-205ENST00000393357 DVL2O14641 736 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 NTN1O95631 604 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 HRGP04196 525 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 CORO1AP31146 461 aaKnown RBP15.67■□□□□ 0.1
PHTF1-205ENST00000393357 CCR7P32248 378 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 ATP6V1E1P36543 226 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 CD79BP40259 229 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 GATMP50440 423 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 MBTPS1Q14703 1052 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 NFE2Q16621 373 aaPredicted RBP15.67■□□□□ 0.1
PHTF1-205ENST00000393357 LCN1P1Q5VSP4 162 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 CHMP1BQ7LBR1 199 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 SLC30A8Q8IWU4 369 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 NLGN2Q8NFZ4 835 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 TBX5Q99593 518 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 OR51B5Q9H339 312 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 SGK2Q9HBY8 427 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 RABL2BQ9UNT1 228 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 POFUT2Q9Y2G5 429 aa15.67■□□□□ 0.1
PHTF1-205ENST00000393357 CD8B2A6NJW9 211 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 CDK2AP1O14519 115 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 GCM2O75603 506 aaPredicted RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 KLKB1P03952 638 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 CD8BP10966 210 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 SOX18P35713 384 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 WNT3P56703 355 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 SELENOWP63302 87 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 MAP4K2Q12851 820 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 DOC2AQ14183 400 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ZNF367Q7RTV3 350 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 MRPS31Q92665 395 aaKnown RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 UPRTQ96BW1 309 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 SAMD11Q96NU1 681 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 NELL2Q99435 816 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 PITX2Q99697 317 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ZNF624Q9P2J8 865 aaPredicted RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 POLHQ9Y253 713 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 CACNA1CQ13936 2221 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 HRO43593 1189 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 UGT2B17O75795 530 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 STATHP02808 62 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 PRPS2P11908 318 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 PRPS1L1P21108 318 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ARF5P84085 180 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 C2orf80Q0P641 193 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 CXorf57Q6NSI4 855 aaKnown RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 PRSS55Q6UWB4 352 aaPredicted RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ZBED6CLQ96FA7 236 aaPredicted RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 SIPA1Q96FS4 1042 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 GABARAPL1Q9H0R8 117 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 P2RY12Q9H244 342 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 PDFQ9HBH1 243 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 TXNL4BQ9NX01 149 aaKnown RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 VPS29Q9UBQ0 182 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 SCML2Q9UQR0 700 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 PCDHB11Q9Y5F2 797 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 GRXCR2A6NFK2 248 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ANKDD1BA6NHY2 528 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 HNRNPCL2B2RXH8 293 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 BPIP17213 487 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 CSTF2P33240 577 aaKnown RBP eCLIP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 CRISP1P54107 249 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 RPA4Q13156 261 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 C1DQ13901 141 aaKnown RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ANKRD54Q6NXT1 300 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 PLEKHM3Q6ZWE6 761 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 VPS37AQ8NEZ2 397 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 ARMC5Q96C12 935 aa15.66■□□□□ 0.1
PHTF1-205ENST00000393357 QRFPRQ96P65 431 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms