RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 IL12RB1P42701 662 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ARHGAP15Q53QZ3 475 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC35F1Q5T1Q4 408 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SYCE2Q6PIF2 218 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CBLL1Q75N03 491 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IQCHQ86VS3 1027 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MMAAQ8IVH4 418 aaKnown RBP13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GPR151Q8TDV0 419 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GATAD2BQ8WXI9 593 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 QRSL1Q9H0R6 528 aaKnown RBP13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NMNAT1Q9HAN9 279 aaPredicted RBP13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SERHLQ9NQF3 203 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMED5Q9Y3A6 229 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZNF646O15015 1829 aaPredicted RBP13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TET1Q8NFU7 2136 aa13.77□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PRAMEF33A0A0G2JMD5 474 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 AGAP5A6NIR3 686 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PRAMEF10O60809 474 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ADORA3P0DMS8 318 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 JUNBP17275 347 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PIK3CBP42338 1070 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RGS6P49758 472 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SELENOWP63302 87 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GSTM4Q03013 218 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 LAPTM4BQ86VI4 370 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FERD3LQ96RJ6 166 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C17orf62Q9BQA9 187 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HDHD5Q9BXW7 423 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CERS4Q9HA82 394 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 UCKL1Q9NWZ5 548 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF232Q9UNY5 417 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CFL2Q9Y281 166 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PCDHGA6Q9Y5G7 932 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 LCTP09848 1927 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 A0A1W2PPK0 400 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 F11P03951 625 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NOS3P29474 1203 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 QPRTQ15274 297 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DUSP7Q16829 419 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ALG1LQ6GMV1 187 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DHRS4L2Q6PKH6 230 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF730Q6ZMV8 503 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FAM129CQ86XR2 697 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KRT78Q8N1N4 520 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 UXS1Q8NBZ7 420 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GEMIN6Q8WXD5 167 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ISG20Q96AZ6 181 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CCDC115Q96NT0 180 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FCRL4Q96PJ5 515 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF300Q96RE9 604 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TAS2R9Q9NYW1 312 aa13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NUFIP1Q9UHK0 495 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C1SP09871 688 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SDHBP21912 280 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PAICSP22234 425 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CSNK2BP67870 215 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KDM4DQ6B0I6 523 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TMEM246Q9BRR3 403 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TSSK6Q9BXA6 273 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NDUFAF4Q9P032 175 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 YY2O15391 372 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC16A6O15403 523 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 VNN2O95498 520 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PSMB5P28074 263 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GJA8P48165 433 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SPHARQ15513 63 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GAREM2Q75VX8 874 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GALNT12Q8IXK2 581 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FCGR1BQ92637 280 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PDLIM5Q96HC4 596 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GASTP01350 101 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 H1F0P07305 194 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CELP19835 753 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RAB15P59190 212 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 B4GALNT1Q00973 533 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GINS1Q14691 196 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MFSD4BQ5TF39 518 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OR2G6Q5TZ20 316 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ADAMTS16Q8TE57 1224 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KLHL6Q8WZ60 621 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NEDD4LQ96PU5 975 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 UCK2Q9BZX2 261 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OR51V1Q9H2C8 321 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ANKRA2Q9H9E1 313 aa13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MRPS23Q9Y3D9 190 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TRBV4-1A0A0J9YWV2 114 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 AP3D1O14617 1153 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PRAMEF4O60810 478 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SOCS5O75159 536 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PRKRAO75569 313 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CLEC2LP0C7M8 214 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CRISP1P54107 249 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PFN3P60673 137 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HEPACAMQ14CZ8 416 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF385BQ569K4 471 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PRAMEF9Q5VWM5 478 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C16orf62Q7Z3J2 963 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PTOV1Q86YD1 416 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms