RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 MINDY4Q4G0A6 757 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 PAGE2Q7Z2X7 111 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 NUDT13Q86X67 352 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 TRIM42Q8IWZ5 723 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 ZNF843Q8N446 348 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 ACOT4Q8N9L9 421 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 OR6Y1Q8NGX8 325 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 TBC1D20Q96BZ9 403 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 HBEGFQ99075 208 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 SLC25A18Q9H1K4 315 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 VPS29Q9UBQ0 182 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 MKL2Q9ULH7 1088 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 DAPP1Q9UN19 280 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 MRPS33Q9Y291 106 aaKnown RBP17.3■□□□□ 0.36
PBX3-205ENST00000373492 FIS1Q9Y3D6 152 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 SERTM1A2A2V5 107 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 IDSB3KWA1 339 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 PCDH17O14917 1159 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 SCELO95171 688 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 HSPA4LO95757 839 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 FHP07954 510 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 CYC1P08574 325 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 BGNP21810 368 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 MMP11P24347 488 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 HTR6P50406 440 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 WDR4P57081 412 aaKnown RBP17.29■□□□□ 0.36
PBX3-205ENST00000373492 RAB38P57729 211 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 FOXL2P58012 376 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 ABCE1P61221 599 aaKnown RBP17.29■□□□□ 0.36
PBX3-205ENST00000373492 RUNX2Q13950 521 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 ABRAXAS2Q15018 415 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 IMPG1Q17R60 797 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 TUBB8Q3ZCM7 444 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 SH2D4BQ5SQS7 431 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 CLEC6AQ6EIG7 209 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 CYP20A1Q6UW02 462 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 ZNF793Q6ZN11 406 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 MED25Q71SY5 747 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 LAPTM4BQ86VI4 370 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 CLYBLQ8N0X4 340 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 TMEM102Q8N9M5 508 aaPredicted RBP17.29■□□□□ 0.36
PBX3-205ENST00000373492 METTL21AQ8WXB1 218 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 RBCK1Q9BYM8 510 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 ING2Q9H160 280 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 LYRM4Q9HD34 91 aa17.29■□□□□ 0.36
PBX3-205ENST00000373492 TLN1Q9Y490 2541 aaKnown RBP17.28■□□□□ 0.36
PBX3-205ENST00000373492 ARHGAP10A1A4S6 786 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 ARGFXA6NJG6 315 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 MKRN2OSH3BPM6 223 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 PEX12O00623 359 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 DNAJB6O75190 326 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 JRKO75564 520 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 FGF4P08620 206 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 SERPINB3P29508 390 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 BSGP35613 385 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 RRADP55042 308 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 LIM2P55344 173 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 STX3Q13277 289 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 SLAMF1Q13291 335 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 MRGPREQ86SM8 312 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 KIRREL3Q8IZU9 778 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 METTL4Q8N3J2 472 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 ZCCHC7Q8N3Z6 543 aaKnown RBP17.28■□□□□ 0.36
PBX3-205ENST00000373492 RAB3IL1Q8TBN0 382 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 ABHD17AQ96GS6 310 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 SORBS1Q9BX66 1292 aaKnown RBP17.28■□□□□ 0.36
PBX3-205ENST00000373492 MRPL1Q9BYD6 325 aaKnown RBP17.28■□□□□ 0.36
PBX3-205ENST00000373492 DDX31Q9H8H2 851 aaKnown RBP17.28■□□□□ 0.36
PBX3-205ENST00000373492 TNFRSF12AQ9NP84 129 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 LYARQ9NX58 379 aaKnown RBP17.28■□□□□ 0.36
PBX3-205ENST00000373492 MS4A12Q9NXJ0 267 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 PHF11Q9UIL8 331 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 ADAM29Q9UKF5 820 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 TRAF6Q9Y4K3 522 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 SPTA1P02549 2419 aa17.28■□□□□ 0.36
PBX3-205ENST00000373492 SLC28A1O00337 649 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 CLDN4O14493 209 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 ATP8B1O43520 1251 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 B4GALT2O60909 372 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 ALOX12BO75342 701 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 CDC123O75794 336 aaPredicted RBP17.27■□□□□ 0.36
PBX3-205ENST00000373492 SLC1A6P48664 564 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 PPP2R2AP63151 447 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 ATP1A4Q13733 1029 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 SPIN4Q56A73 249 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 HSP90B2PQ58FF3 399 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 FAM219BQ5XKK7 198 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 KANK2Q63ZY3 851 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 ATG16L1Q676U5 607 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 SCIMPQ6UWF3 145 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 EFCAB3Q8N7B9 438 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 C9orf43Q8TAL5 461 aaPredicted RBP17.27■□□□□ 0.36
PBX3-205ENST00000373492 AGR3Q8TD06 166 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 FER1L6-AS2Q96M78 137 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 ZNF717Q9BY31 904 aaPredicted RBP17.27■□□□□ 0.36
PBX3-205ENST00000373492 ACPTQ9BZG2 426 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 VN1R1Q9GZP7 353 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 C19orf25Q9UFG5 118 aaPredicted RBP17.27■□□□□ 0.36
PBX3-205ENST00000373492 FBXW2Q9UKT8 454 aa17.27■□□□□ 0.36
PBX3-205ENST00000373492 BSNQ9UPA5 3926 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms