RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 ALPK3Q96L96 1907 aa21.81■■□□□ 1.08
BRD3-202ENST00000371834 PLXND1Q9Y4D7 1925 aa21.81■■□□□ 1.08
BRD3-202ENST00000371834 RTCAO00442 366 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 SRPRAP08240 638 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 HSMCR30P0CW71 290 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 PTX3P26022 381 aaPredicted RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 LIMS1P48059 325 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 KIAA1958Q8N8K9 716 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 B3GNT7Q8NFL0 401 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 NXPE3Q969Y0 559 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 ARRDC3Q96B67 414 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 ZDHHC5Q9C0B5 715 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 ABCG4Q9H172 646 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 HCN4Q9Y3Q4 1203 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 FAM32AQ9Y421 112 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 CFAP20Q9Y6A4 193 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 PTPRSQ13332 1948 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 MTCL1Q9Y4B5 1905 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 DSCR3O14972 297 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 GASTP01350 101 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 TPP2P29144 1249 aaPredicted RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 UGT2B10P36537 528 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 RPL3P39023 403 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 EIF2DP41214 584 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 PPP5CP53041 499 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 RPS3AP61247 264 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 ELOAQ14241 798 aaKnown RBP21.8■■□□□ 1.08
BRD3-202ENST00000371834 TMIGD1Q6UXZ0 262 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 DEPDC4Q8N2C3 294 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 DENND6BQ8NEG7 585 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 ITM2CQ9NQX7 267 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 ABCB10Q9NRK6 738 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 ENPP4Q9Y6X5 453 aa21.8■■□□□ 1.08
BRD3-202ENST00000371834 CHD7Q9P2D1 2997 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 CCDC88CQ9P219 2028 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 TRIM43BA6NCK2 446 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 PSMD11O00231 422 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 CCNB2O95067 398 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 C6P13671 934 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 ST8SIA6P61647 398 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 TUBA1BP68363 451 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 ARMCX4Q5H9R4 360 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 C10orf62Q5T681 223 aaPredicted RBP21.79■■□□□ 1.08
BRD3-202ENST00000371834 TUBA1AQ71U36 451 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 GRASPQ7Z6J2 395 aaPredicted RBP21.79■■□□□ 1.08
BRD3-202ENST00000371834 ARMC8Q8IUR7 673 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 SLC44A2Q8IWA5 706 aaPredicted RBP21.79■■□□□ 1.08
BRD3-202ENST00000371834 OR5AR1Q8NGP9 310 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 TRIM43Q96BQ3 446 aaPredicted RBP21.79■■□□□ 1.08
BRD3-202ENST00000371834 COL21A1Q96P44 957 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 ROGDIQ9GZN7 287 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 ANGPT4Q9Y264 503 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 PAPLNO95428 1278 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 KRT75O95678 551 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 CYP17A1P05093 508 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 CBLP22681 906 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 ACADLP28330 430 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 DSTNP60981 165 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 PUM1Q14671 1186 aaKnown RBP eCLIP21.79■■□□□ 1.082e-9■■□□□ 14.5
BRD3-202ENST00000371834 PRAMEF14Q5SWL7 426 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 PRAMEF13Q5VWM6 474 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 TNFAIP8L2Q6P589 184 aaPredicted RBP21.79■■□□□ 1.08
BRD3-202ENST00000371834 HCAR2Q8TDS4 363 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 CENPOQ9BU64 300 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 SLAMF7Q9NQ25 335 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 ASF1AQ9Y294 204 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 TMEM98Q9Y2Y6 226 aa21.79■■□□□ 1.08
BRD3-202ENST00000371834 KIAA1549LQ6ZVL6 1849 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 POU1F1P28069 291 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 PIK3CBP42338 1070 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 SLC13A2Q13183 592 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 KLHL17Q6TDP4 642 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 MINDY2Q8NBR6 621 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 CHCHD6Q9BRQ6 235 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 RSPO3Q9BXY4 272 aaPredicted RBP21.78■■□□□ 1.08
BRD3-202ENST00000371834 ZCCHC2Q9C0B9 1178 aaKnown RBP21.78■■□□□ 1.08
BRD3-202ENST00000371834 MMP27Q9H306 513 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 SAGE1Q9NXZ1 904 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 C5AR2Q9P296 337 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 PRRT4C9JH25 899 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 FFAR1O14842 300 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 LZTS3O60299 673 aaPredicted RBP21.78■■□□□ 1.08
BRD3-202ENST00000371834 TBX6O95947 436 aaPredicted RBP21.78■■□□□ 1.08
BRD3-202ENST00000371834 IFNA14P01570 189 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 RPLP0P05388 317 aaKnown RBP21.78■■□□□ 1.08
BRD3-202ENST00000371834 CEBPBP17676 345 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 CEACAM20Q6UY09 585 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 USP43Q70EL4 1123 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 SLC9B2Q86UD5 537 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 ADGRF3Q8IZF5 1079 aa21.78■■□□□ 1.08
BRD3-202ENST00000371834 MRPL43Q8N983 215 aaKnown RBP21.78■■□□□ 1.08
BRD3-202ENST00000371834 NMNAT1Q9HAN9 279 aaPredicted RBP21.78■■□□□ 1.08
BRD3-202ENST00000371834 CHMP24386 653 aa21.77■■□□□ 1.08
BRD3-202ENST00000371834 EIF2B2P49770 351 aaKnown RBP21.77■■□□□ 1.08
BRD3-202ENST00000371834 HMGA2P52926 109 aa21.77■■□□□ 1.08
BRD3-202ENST00000371834 LIM2P55344 173 aa21.77■■□□□ 1.08
BRD3-202ENST00000371834 DOC2BQ14184 412 aa21.77■■□□□ 1.08
BRD3-202ENST00000371834 LEXMQ3ZCV2 418 aa21.77■■□□□ 1.08
BRD3-202ENST00000371834 HORMAD2Q8N7B1 307 aa21.77■■□□□ 1.08
BRD3-202ENST00000371834 ST13P5Q8NFI4 369 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms