RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ERGIC3Q9Y282 383 aa14.22□□□□□ -0.13
LMO4-201ENST00000370542 PCDHGB7Q9Y5F8 929 aa14.22□□□□□ -0.13
LMO4-201ENST00000370542 PCDHGB5Q9Y5G0 923 aa14.22□□□□□ -0.13
LMO4-201ENST00000370542 SETD2Q9BYW2 2564 aaPredicted RBP14.22□□□□□ -0.13
LMO4-201ENST00000370542 A0A087X1B8 175 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 GSAPA4D1B5 854 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 TMEM150CB9EJG8 249 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 SULT1C4O75897 302 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 FASP25445 335 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 SESN2P58004 480 aaPredicted RBP14.21□□□□□ -0.13
LMO4-201ENST00000370542 CDH17Q12864 832 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 ATP6AP1Q15904 470 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 SLC36A3Q495N2 470 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 COQ5Q5HYK3 327 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 CCNYL2Q5T2Q4 361 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 REP15Q6BDI9 236 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 TAS2R42Q7RTR8 314 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 SYTL1Q8IYJ3 562 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 TBC1D21Q8IYX1 336 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 OR5K2Q8NHB8 316 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 PPWD1Q96BP3 646 aaKnown RBP14.21□□□□□ -0.13
LMO4-201ENST00000370542 CENPNQ96H22 339 aaPredicted RBP14.21□□□□□ -0.13
LMO4-201ENST00000370542 OR2A14Q96R47 310 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 TRMOQ9BU70 441 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 WDR12Q9GZL7 423 aaKnown RBP14.21□□□□□ -0.13
LMO4-201ENST00000370542 ING2Q9H160 280 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 WDR55Q9H6Y2 383 aaPredicted RBP14.21□□□□□ -0.13
LMO4-201ENST00000370542 TMEM165Q9HC07 324 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 CASS4Q9NQ75 786 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 OR6C2Q9NZP2 312 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 SELENONQ9NZV5 590 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.21□□□□□ -0.13
LMO4-201ENST00000370542 POLG2Q9UHN1 485 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 SERTAD3Q9UJW9 196 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 NDUFAF1Q9Y375 327 aa14.21□□□□□ -0.13
LMO4-201ENST00000370542 GPC6Q9Y625 555 aaPredicted RBP14.21□□□□□ -0.13
LMO4-201ENST00000370542 ZNF839A8K0R7 811 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 H3BMQ9 156 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 BOLA2-SMG1P6H3BVE0 249 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 GPC4O75487 556 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 BCL10O95999 233 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 FTH1P02794 183 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 HBQ1P09105 142 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 HSD17B1P14061 328 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 PSMA4P25789 261 aaKnown RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 SHMT2P34897 504 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 CAPGP40121 348 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 HLCSP50747 726 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 ITGA1P56199 1179 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 STX1BP61266 288 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 ATP6V0D1P61421 351 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 OCA2Q04671 838 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 PRKG2Q13237 762 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 FASTKQ14296 549 aaKnown RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 MTX3Q5HYI7 312 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 LYPLAL1Q5VWZ2 237 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 CPZQ66K79 652 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 C8orf82Q6P1X6 216 aaPredicted RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 MYO1HQ8N1T3 1032 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 DHRSXQ8N5I4 330 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 SNX31Q8N9S9 440 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 OR52K1Q8NGK4 314 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 OR5AR1Q8NGP9 310 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 TSPEARQ8WU66 669 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 C17orf50Q8WW18 174 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 ZNF669Q96BR6 464 aaPredicted RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 TCTN2Q96GX1 697 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 SCYL1Q96KG9 808 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 COG8Q96MW5 612 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 PSD2Q9BQI7 771 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 MCMBPQ9BTE3 642 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 HGH1Q9BTY7 390 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 MENTQ9BUN1 341 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 XKR8Q9H6D3 395 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 MEAF6Q9HAF1 191 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 FAM60AQ9NP50 221 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 ENAMQ9NRM1 1142 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 PIH1D1Q9NWS0 290 aaKnown RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 TDRKHQ9Y2W6 561 aaKnown RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 FAM32AQ9Y421 112 aaKnown RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 PSAT1Q9Y617 370 aa14.2□□□□□ -0.14
LMO4-201ENST00000370542 TNRC6AQ8NDV7 1962 aaKnown RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 SNRNP200O75643 2136 aaKnown RBP14.2□□□□□ -0.14
LMO4-201ENST00000370542 ZFHX3Q15911 3703 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ANKRD12Q6UB98 2062 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 CACNA1DQ01668 2161 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 PCSK5Q92824 1860 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 OR51F1A6NGY5 319 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 SAC3D1A6NKF1 404 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 E7EQ34 232 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 SDHDO14521 159 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 MRASO14807 208 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 UBDO15205 165 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 CLOCKO15516 846 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 ZNF749O43361 778 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 NRP2O60462 931 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 KLF7O75840 302 aaPredicted RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 RASAL1O95294 804 aa14.19□□□□□ -0.14
LMO4-201ENST00000370542 CHRM5P08912 532 aaPredicted RBP14.19□□□□□ -0.14
LMO4-201ENST00000370542 ERVK-10P10266 1014 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms