RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 GGT1P19440 569 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 PPIGQ13427 754 aaKnown RBP eCLIP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 C6orf136Q5SQH8 315 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 CREB3L2Q70SY1 520 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 OR2T33Q8NG76 320 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 CMTM7Q96FZ5 175 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 PSKH2Q96QS6 385 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SNX18Q96RF0 628 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 RAD9AQ99638 391 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 FBXW2Q9UKT8 454 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 COL5A2P05997 1499 aaPredicted RBP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CABIN1Q9Y6J0 2220 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CH25HO95992 272 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 RETP07949 1114 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 HTR1BP28222 390 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 POU4F2Q12837 409 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 PUM1Q14671 1186 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 GNMTQ14749 295 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 PARP16Q8N5Y8 322 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 OR5T2Q8NGG2 359 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 ABHD5Q8WTS1 349 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 TMEM68Q96MH6 324 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 KCNH6Q9H252 994 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 GBA2Q9HCG7 927 aaPredicted RBP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 RANGRFQ9HD47 186 aaPredicted RBP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 PRMT8Q9NR22 394 aaPredicted RBP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 GPSM3Q9Y4H4 160 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 COLEC10Q9Y6Z7 277 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 OR51F1A6NGY5 319 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 SAP18O00422 153 aaKnown RBP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 MANBAO00462 879 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF35P13682 527 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CLCN7P51798 805 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 C1QTNF8P60827 252 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 GPR19Q15760 415 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 TREX2Q9BQ50 279 aaPredicted RBP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 RNF19AQ9NV58 838 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 J3KR12 359 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 M0R2N6 131 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 OGDHQ02218 1023 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 C2orf76Q3KRA6 126 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 MAP1SQ66K74 1059 aaPredicted RBP8.46□□□□□ -1.06
COL6A6-201ENST00000358511 NUP54Q7Z3B4 507 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF101Q8IZC7 436 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 TBC1D15Q8TC07 691 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CPT1CQ8TCG5 803 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 SGCDQ92629 289 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 PCED1BQ96HM7 432 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 GTF2IRD1Q9UHL9 959 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 RIMS3Q9UJD0 308 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 IGLV3-22A0A075B6J6 115 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 ATE1O95260 518 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 ASGR1P07306 291 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 HDCP19113 662 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 PITPNBP48739 271 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 GSTM4Q03013 218 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CREMQ03060 361 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CDK5R2Q13319 367 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 ZFAND4Q86XD8 727 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 IFNL1Q8IU54 200 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 SYT14Q8NB59 555 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 RGMAQ96B86 450 aa8.46□□□□□ -1.06
COL6A6-201ENST00000358511 CHRNA4P43681 627 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 DIO3P55073 304 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 GRIN2CQ14957 1233 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 SPARTQ8N0X7 666 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 WDSUB1Q8N9V3 476 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 RANBP9Q96S59 729 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 TEX10Q9NXF1 929 aaPredicted RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 LAMP5Q9UJQ1 280 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CD8B2A6NJW9 211 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CD8BP10966 210 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 HLA-EP13747 358 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 PPM1AP35813 382 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CEACAM19Q7Z692 300 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 COMTD1Q86VU5 262 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 OR6Q1Q8NGQ2 317 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ADAM2Q99965 735 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ERVW-1Q9UQF0 538 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 AQP9O43315 295 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 MBOAT1Q6ZNC8 495 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ESAMQ96AP7 390 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 C5orf34Q96MH7 638 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 SULT4A1Q9BR01 284 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 NT5DC2Q9H857 520 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CTPS2Q9NRF8 586 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ZCCHC3Q9NUD5 404 aaKnown RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CACNG2Q9Y698 323 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 RPP14O95059 124 aaKnown RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 PROS1P07225 676 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CD47Q08722 323 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 NIPAL4Q0D2K0 466 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 TRAM2Q15035 370 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CDK10Q15131 360 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ALG10Q5BKT4 473 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 PIGVQ9NUD9 493 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms