RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 WDR48Q8TAF3 677 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 FAR1Q8WVX9 515 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 IPCEF1Q8WWN9 437 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SGCDQ92629 289 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 RORBQ92753 470 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PRSS16Q9NQE7 514 aa13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 THAP10Q9P2Z0 257 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 SAMHD1Q9Y3Z3 626 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PCYT1BQ9Y5K3 369 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-203ENST00000358028 PLXND1Q9Y4D7 1925 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 SPAG17Q6Q759 2223 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 DMXL1Q9Y485 3027 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 MYO1GB0I1T2 1018 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 PTGES3LE9PB15 166 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 E9PQ18 207 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 SLC22A1O15245 554 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 BCAS1O75363 584 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 TGFB1P01137 390 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 EPHX1P07099 455 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 NUDT7P0C024 238 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 HOXB2P14652 356 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 KELP23276 732 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 PTX3P26022 381 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 ACVR2AP27037 513 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 HTR1BP28222 390 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 RPL3P39023 403 aaKnown RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 PIK3CBP42338 1070 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 CLK3P49761 638 aaKnown RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 SLC35A2P78381 396 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 VLDLRP98155 873 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 MEF2AQ02078 507 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 EMX1Q04741 257 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 RPA4Q13156 261 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 EOGTQ5NDL2 527 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 KIAA1614Q5VZ46 1190 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 KIAA1211LQ6NV74 962 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 VTCN1Q7Z7D3 282 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 B3GNT8Q7Z7M8 397 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 GALNT5Q7Z7M9 940 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 ZNF554Q86TJ5 538 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 METTL4Q8N3J2 472 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 GOT1L1Q8NHS2 421 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 C16orf78Q8WTQ4 265 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 UBE2E3Q969T4 207 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 RAD51AP1Q96B01 352 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 COX4I2Q96KJ9 171 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 IL17FQ96PD4 163 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 BARD1Q99728 777 aaKnown RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 OR51B5Q9H339 312 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 MYNNQ9NPC7 610 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 NECTIN3Q9NQS3 549 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 KRT84Q9NSB2 600 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 ATAD3AQ9NVI7 634 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 PDP1Q9P0J1 537 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 KIF17Q9P2E2 1029 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 PLAGL1Q9UM63 463 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 PADI2Q9Y2J8 665 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 TSC22D4Q9Y3Q8 395 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 PRKAB1Q9Y478 270 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
NIPAL3-203ENST00000358028 A0A1W2PQF6 199 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 SAP18O00422 153 aaKnown RBP13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 FURINP09958 794 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 ENPP2Q13822 863 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 PDE7AQ13946 482 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 MAD2L1BPQ15013 274 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 PIP5KL1Q5T9C9 394 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 C16orf87Q6PH81 154 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 DCUN1D3Q8IWE4 304 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 PARP8Q8N3A8 854 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 C11orf65Q8NCR3 313 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 OR5AR1Q8NGP9 310 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 CNIH3Q8TBE1 160 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 GIPC3Q8TF64 312 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 ABTB1Q969K4 478 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 GABRG3Q99928 467 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 DGCR6LQ9BY27 220 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 CCDC90BQ9GZT6 254 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 PCDHGB3Q9Y5G1 929 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 CEP192Q8TEP8 1941 aa13.64□□□□□ -0.23
NIPAL3-203ENST00000358028 SUV39H1O43463 412 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 KLHL18O94889 574 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 INMTO95050 263 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 DIRAS1O95057 198 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 ZBTB11O95625 1053 aaPredicted RBP13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 GBAP04062 536 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 PCCBP05166 539 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 OCA2Q04671 838 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 RBBP4Q09028 425 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 C2orf80Q0P641 193 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 NPTX1Q15818 432 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 CTF1Q16619 201 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 PROX2Q3B8N5 592 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 ZNF528Q3MIS6 628 aa13.63□□□□□ -0.23
NIPAL3-203ENST00000358028 IQCCQ4KMZ1 466 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms