RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TMIGD1Q6UXZ0 262 aa18.68■□□□□ 0.58
COL13A1-201ENST00000354547 PTCHD4Q6ZW05 846 aa18.68■□□□□ 0.58
COL13A1-201ENST00000354547 ZNF547Q8IVP9 402 aa18.68■□□□□ 0.58
COL13A1-201ENST00000354547 SFTPA1Q8IWL2 248 aa18.68■□□□□ 0.58
COL13A1-201ENST00000354547 GEMIN6Q8WXD5 167 aaKnown RBP18.68■□□□□ 0.58
COL13A1-201ENST00000354547 METTL2AQ96IZ6 378 aaKnown RBP18.68■□□□□ 0.58
COL13A1-201ENST00000354547 LRRC3BQ96PB8 259 aa18.68■□□□□ 0.58
COL13A1-201ENST00000354547 F2RL3Q96RI0 385 aa18.68■□□□□ 0.58
COL13A1-201ENST00000354547 MAFFQ9ULX9 164 aa18.68■□□□□ 0.58
COL13A1-201ENST00000354547 CKAP5Q14008 2032 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 FEZF1A0PJY2 475 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 CCNB2O95067 398 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 CNR2P34972 360 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 PTGER1P34995 402 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 TBCEQ15813 527 aaPredicted RBP18.67■□□□□ 0.58
COL13A1-201ENST00000354547 POC5Q8NA72 575 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 NXPE3Q969Y0 559 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 OTUB1Q96FW1 271 aaPredicted RBP18.67■□□□□ 0.58
COL13A1-201ENST00000354547 C5orf58C9J3I9 102 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 RPLP0P05388 317 aaKnown RBP18.67■□□□□ 0.58
COL13A1-201ENST00000354547 SERPIND1P05546 499 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 ITGA2P17301 1181 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 PPP5CP53041 499 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 DSTNP60981 165 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 CSNK2BP67870 215 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 FCHO2Q0JRZ9 810 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 DHCR24Q15392 516 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 UTS2BQ765I0 119 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 OLIG3Q7RTU3 272 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 NUS1Q96E22 293 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 MAPRE3Q9UPY8 281 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 HCN4Q9Y3Q4 1203 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 SNX11Q9Y5W9 270 aa18.67■□□□□ 0.58
COL13A1-201ENST00000354547 TPST2O60704 377 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 TMED10P49755 219 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 CNTN1Q12860 1018 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 ZNF77Q15935 545 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 SLC46A3Q7Z3Q1 461 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 C11orf96Q7Z7L8 435 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 HEATR4Q86WZ0 1026 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 RBM45Q8IUH3 476 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 FCGR1BQ92637 280 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 NLNQ9BYT8 704 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 NMNAT1Q9HAN9 279 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 ANGPT4Q9Y264 503 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 TRBV4-1A0A0J9YWV2 114 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 DSCR3O14972 297 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 DLGAP3O95886 979 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 IFNW1P05000 195 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 CLTBP09497 229 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 ALOX12P18054 663 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 PSMB5P28074 263 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 MANFP55145 182 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 FNDC3BQ53EP0 1204 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 PRAMEF14Q5SWL7 426 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 PRAMEF13Q5VWM6 474 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 KLHL17Q6TDP4 642 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 LAS2Q8IYD9 372 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 DEPDC4Q8N2C3 294 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 GOT1L1Q8NHS2 421 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 EXOSC8Q96B26 276 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 SGPP1Q9BX95 441 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 TM7SF3Q9NS93 570 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 TBC1D14Q9P2M4 693 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 TAC3Q9UHF0 121 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 FOXE1O00358 373 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 SPINT1O43278 529 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 CNOT3O75175 753 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 C6P13671 934 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 EIF2DP41214 584 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 MAGEA10P43363 369 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 XCR1P46094 333 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 CDC42P60953 191 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 COL9A2Q14055 689 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 TSTQ16762 297 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 SPDYE7PQ495Y7 208 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 TPRG1LQ5T0D9 272 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 DEF8Q6ZN54 512 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 VN1R5Q7Z5H4 357 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 METTL4Q8N3J2 472 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 HORMAD2Q8N7B1 307 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 ARRDC3Q96B67 414 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 COL21A1Q96P44 957 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 KCNS3Q9BQ31 491 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 EXOSC4Q9NPD3 245 aaKnown RBP18.66■□□□□ 0.58
COL13A1-201ENST00000354547 SLAMF7Q9NQ25 335 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 QPCTLQ9NXS2 382 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 ENPP4Q9Y6X5 453 aa18.66■□□□□ 0.58
COL13A1-201ENST00000354547 METTL15A6NJ78 407 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 CKMT1AP12532 417 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 EPCAMP16422 314 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 CHMP24386 653 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 VIPR2P41587 438 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 RGS6P49758 472 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 LIM2P55344 173 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 EEF1A2Q05639 463 aaKnown RBP18.65■□□□□ 0.58
COL13A1-201ENST00000354547 PUM1Q14671 1186 aaKnown RBP eCLIP18.65■□□□□ 0.58
COL13A1-201ENST00000354547 ZNF630Q2M218 657 aaPredicted RBP18.65■□□□□ 0.58
COL13A1-201ENST00000354547 USP43Q70EL4 1123 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 BCDIN3DQ7Z5W3 292 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms