RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 C9P02748 559 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CDH1P12830 882 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RPA2P15927 270 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 GM2AP17900 193 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ARF4P18085 180 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PDX1P52945 283 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RAG2P55895 527 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CACNG1Q06432 222 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TRAP1Q12931 704 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FOXF2Q12947 444 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZBTB17Q13105 803 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 KEAP1Q14145 624 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PDIA5Q14554 519 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CLPPQ16740 277 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 DCAF12Q5T6F0 453 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ASPHD2Q6ICH7 369 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 OR4A47Q6IF82 309 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SLC39A4Q6P5W5 647 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF679Q8IYX0 411 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RNF113BQ8IZP6 322 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CIARTQ8N365 385 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZCCHC7Q8N3Z6 543 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 LRRC17Q8N6Y2 441 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF114Q8NC26 417 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FAM216AQ8WUB2 273 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM255BQ8WV15 326 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PHYHIPQ92561 330 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 LPAR1Q92633 364 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM45BQ96B21 275 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SLCO4A1Q96BD0 722 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RAB3CQ96E17 227 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 RAB40CQ96S21 281 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 IL25Q9H293 177 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 DPEP2Q9H4A9 486 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FAM207AQ9NSI2 230 aaPredicted RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM30AQ9NV96 361 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TECRQ9NZ01 308 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 POMT2Q9UKY4 750 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 FOXJ3Q9UPW0 622 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 C2CD2Q9Y426 696 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 U3KQV3 271 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 SBF2Q86WG5 1849 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 DISP1Q96F81 1524 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 PHLPP2Q6ZVD8 1323 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CELSR3Q9NYQ7 3312 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CLRN2A0PK11 232 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 DCXO43602 365 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 UFL1O94874 794 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GAS8O95995 478 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 LDLRP01130 860 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PRKCGP05129 697 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 UGT2B4P06133 528 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 H1F0P07305 194 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PSG1P11464 419 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SELEP16581 610 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CA4P22748 312 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RPL21P46778 160 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PEX5P50542 639 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 KCNK10P57789 538 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PDZK1IP1Q13113 114 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GPM6BQ13491 265 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TSTA3Q13630 321 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 LRRC37A5PQ49AS3 106 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GPAT3Q53EU6 434 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 MANEAQ5SRI9 462 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NKAIN2Q5VXU1 208 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NCR3LG1Q68D85 454 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NANOGP1Q8N7R0 232 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 BCORP1Q8N888 145 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 OR1J1Q8NGS3 322 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GLYATL1Q969I3 302 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FBXO32Q969P5 355 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FAM213AQ9BRX8 229 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ZPBPQ9BS86 351 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ZMYND12Q9H0C1 365 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FZD3Q9NPG1 666 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TUBA8Q9NY65 449 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 WNT16Q9UBV4 365 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 FZD10Q9ULW2 581 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 DIMT1Q9UNQ2 313 aaKnown RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 AMDHD2Q9Y303 409 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 COLEC10Q9Y6Z7 277 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 MROH1Q8NDA8 1641 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 CHD8Q9HCK8 2581 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 KDM5DQ9BY66 1539 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PFASO15067 1338 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 PRDM15P57071 1507 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 A0A0G2JNG1 304 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 A0A1B0GWJ7 208 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 RPS10-NUDT3A0A1W2PQS6 291 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 OGTO15294 1046 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF821O75541 412 aaPredicted RBP1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SYNGR4O95473 234 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 HPRP00739 348 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 SERPINA3P01011 423 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 IGHV4-30-4P0DP06 118 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 THRBP10828 461 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 NCK1P16333 377 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 GPX3P22352 226 aa1.48□□□□□ -2.17
BRCA1-202ENST00000354071 TMOD1P28289 359 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms