RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ANKUB1A6NFN9 424 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 A8MUI8 341 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 H0YIV9 168 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 DNAJB6O75190 326 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 SCELO95171 688 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 CBX6O95503 412 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 TUBBP07437 444 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 GMPRP36959 345 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 NR6A1Q15406 480 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 C10orf62Q5T681 223 aaPredicted RBP12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 TEX9Q8N6V9 391 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 EIF1ADQ8N9N8 165 aaKnown RBP12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 LRRN4CLQ8ND94 238 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 CATSPER1Q8NEC5 780 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 OR7G3Q8NG95 312 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 ELP5Q8TE02 316 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 DCAKDQ8WVC6 231 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 FAR1Q8WVX9 515 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRM3Q9NNZ6 103 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 FETUBQ9UGM5 382 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 NFU1Q9UMS0 254 aa12.5□□□□□ -0.41
SIRPB3P-201ENST00000340424 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 POC1B-GALNT4F8VUJ3 575 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 STX16-NPEPL1H3BU86 382 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 STX16O14662 325 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRAMEF2O60811 474 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 SMIM24O75264 130 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 AGFG2O95081 481 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 CRYABP02511 175 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 SNRPAP09012 282 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PCNAP12004 261 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 MAOAP21397 527 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 LIM2P55344 173 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 BTG2P78543 158 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 GTF2H2Q13888 395 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 RUNX2Q13950 521 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 AP5B1Q2VPB7 878 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 UBAP2Q5T6F2 1119 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 KHDRBS2Q5VWX1 349 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 GTF2H2CQ6P1K8 395 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 CYP4X1Q8N118 509 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 L3MBTL4Q8NA19 623 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 DNAJB8Q8NHS0 232 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 GRHL3Q8TE85 626 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 MAGEB10Q96LZ2 347 aaPredicted RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 F2RL3Q96RI0 385 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 MRPL57Q9BQC6 102 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 UTP23Q9BRU9 249 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 ACTR8Q9H981 624 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 ADAP2Q9NPF8 381 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRDM7Q9NQW5 492 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRTFDC1Q9NRG1 225 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 OLAHQ9NV23 265 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 MS4A12Q9NXJ0 267 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PLA2G3Q9NZ20 509 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 CPSF2Q9P2I0 782 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 PPIEQ9UNP9 301 aaKnown RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 NTNG1Q9Y2I2 539 aa12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 V9GYY5 206 aaPredicted RBP12.49□□□□□ -0.41
SIRPB3P-201ENST00000340424 A0A0G2JN53 185 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 TRIM49D1C9J1S8 452 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 FAM227AF5H4B4 570 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 CYR61O00622 381 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 E2F3O00716 465 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 RIPK2O43353 540 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 CTNSO60931 367 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 DDAH2O95865 285 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 HIST1H1TP22492 207 aaPredicted RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 ATP5A1P25705 553 aaKnown RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 PTX3P26022 381 aaPredicted RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 CERS1P27544 350 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 SSR2P43308 183 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 SRSF1Q07955 248 aaKnown RBP eCLIP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 SLC13A2Q13183 592 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 BIKQ13323 160 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 MRPL49Q13405 166 aaKnown RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 ESPL1Q14674 2120 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 DEPDC1Q5TB30 811 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 TIFABQ6ZNK6 161 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 GOLGA7Q7Z5G4 137 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 RPS19BP1Q86WX3 136 aaKnown RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 MYLK4Q86YV6 388 aaPredicted RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 CRLF3Q8IUI8 442 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 BEST3Q8N1M1 668 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 ARMC10Q8N2F6 343 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 PTGR2Q8N8N7 351 aaPredicted RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 ACOT4Q8N9L9 421 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 B3GNT7Q8NFL0 401 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 HUS1BQ8NHY5 278 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 RGMAQ96B86 450 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 SLX1AQ9BQ83 275 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 MRPL46Q9H2W6 279 aaKnown RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 IPPKQ9H8X2 491 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms