RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 CLDN9O95484 217 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 SBK3P0C264 359 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 HIST1H1TP22492 207 aaPredicted RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 ARL1P40616 181 aaPredicted RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 SSR2P43308 183 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CCNG1P51959 295 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 SLC13A2Q13183 592 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 MRPL49Q13405 166 aaKnown RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 NR6A1Q15406 480 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 AP5B1Q2VPB7 878 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 DEPDC1Q5TB30 811 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CLEC18BQ6UXF7 455 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CLNKQ7Z7G1 428 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CRLF3Q8IUI8 442 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 ZNF595Q8IYB9 648 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 BEST3Q8N1M1 668 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 TMEM151AQ8N4L1 468 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 KIF2BQ8N4N8 673 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 L3MBTL4Q8NA19 623 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CLEC18CQ8NCF0 446 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 NFAM1Q8NET5 270 aaPredicted RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 OR52B6Q8NGF0 335 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 ELP5Q8TE02 316 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 ATP6V1E2Q96A05 226 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 REPS1Q96D71 796 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 ZNF354BQ96LW1 612 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 NSUN5Q96P11 429 aaKnown RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CDK15Q96Q40 435 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 NPAS2Q99743 824 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 MAPKAP1Q9BPZ7 522 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 SORBS1Q9BX66 1292 aaKnown RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 LYRM4Q9HD34 91 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 AGPAT4Q9NRZ5 378 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 PSMC3IPQ9P2W1 217 aaPredicted RBP13.68□□□□□ -0.22
ERCC1-203ENST00000340192 FETUBQ9UGM5 382 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 CLDN16Q9Y5I7 305 aa13.68□□□□□ -0.22
ERCC1-203ENST00000340192 IQANK1A0A1B0GTG1 560 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 OR5H15A6NDH6 313 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 MAN1A2O60476 641 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 MYO1DO94832 1006 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 SCELO95171 688 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 TNFRSF8P28908 595 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 PPP2R1BP30154 601 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 ST13P50502 369 aaKnown RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 RAP1GDS1P52306 607 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 TAS2R50P59544 299 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 RPS13P62277 151 aaKnown RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 PHEXP78562 749 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 SRSF1Q07955 248 aaKnown RBP eCLIP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 UBAP2LQ14157 1087 aaKnown RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 RCN2Q14257 317 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 ZRSR2Q15696 482 aaKnown RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 MEP1AQ16819 746 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 OR4C11Q6IEV9 310 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 RPUSD3Q6P087 351 aaKnown RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 RPS27LQ71UM5 84 aaKnown RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 SLC5A8Q8N695 610 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 WDR20Q8TBZ3 569 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 UBLCP1Q8WVY7 318 aaPredicted RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 RGMAQ96B86 450 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 CENPKQ9BS16 269 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 ZBTB26Q9HCK0 441 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 PNO1Q9NRX1 252 aaKnown RBP13.67□□□□□ -0.22
ERCC1-203ENST00000340192 TBK1Q9UHD2 729 aa13.67□□□□□ -0.22
ERCC1-203ENST00000340192 A8MT66 165 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 GOLGA8RI6L899 631 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 PLPP1O14494 284 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 CTNSO60931 367 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 CBX6O95503 412 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 SHBGP04278 402 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 PTX3P26022 381 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-203ENST00000340192 NEK2P51955 445 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 TRAF3Q13114 568 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 TUBA3CQ13748 450 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 TERF2Q15554 542 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 TUBA3EQ6PEY2 450 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 LCA5Q86VQ0 697 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 FAM26EQ8N5C1 309 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 B3GNT7Q8NFL0 401 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 SUN3Q8TAQ9 357 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 CCDC77Q9BR77 488 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 NTMT1Q9BV86 223 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 CDCP1Q9H5V8 836 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 SEMA4BQ9NPR2 832 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-203ENST00000340192 ANKRD10Q9NXR5 420 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 TMEM216Q9P0N5 145 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 ABI3Q9P2A4 366 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 FBXW2Q9UKT8 454 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 SPACA6W5XKT8 324 aa13.66□□□□□ -0.22
ERCC1-203ENST00000340192 RP1L1Q8IWN7 2480 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-203ENST00000340192 UTP20O75691 2785 aaKnown RBP13.66□□□□□ -0.22
ERCC1-203ENST00000340192 MYOCOSA0A1B0GUC4 107 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 FOXE1O00358 373 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-203ENST00000340192 PRAMEF2O60811 474 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 LDB3O75112 727 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 ETHE1O95571 254 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 RPS17P08708 135 aaKnown RBP13.65□□□□□ -0.22
ERCC1-203ENST00000340192 PYGBP11216 843 aa13.65□□□□□ -0.22
ERCC1-203ENST00000340192 CPN2P22792 545 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms