RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 DNASE1L2Q92874 299 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 RNF31Q96EP0 1072 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 C19orf43Q9BQ61 176 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 EFCAB11Q9BUY7 163 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 LHX9Q9NQ69 397 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TRPC4Q9UBN4 977 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 IGKV1-8A0A0C4DH67 115 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 A0A0J9YVX5 310 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 TRIM64CA6NLI5 447 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 FRS3O43559 492 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 CCNA2P20248 432 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 FPR1P21462 350 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 DCKP27707 260 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 CD6P30203 668 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 KDM4DQ6B0I6 523 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 RNF165Q6ZSG1 346 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ARHGAP22Q7Z5H3 698 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 TRIM73Q86UV7 250 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 COMTD1Q86VU5 262 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 LGI4Q8N135 537 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ZNF557Q8N988 423 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 HDAC2Q92769 488 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 COQ8BQ96D53 544 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 DOHHQ9BU89 302 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 AICDAQ9GZX7 198 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 MAGIXQ9H6Y5 334 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 C11orf16Q9NQ32 467 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 GPR83Q9NYM4 423 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 TAS2R9Q9NYW1 312 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 DPP7Q9UHL4 492 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 LYVE1Q9Y5Y7 322 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 TDRD6O60522 2096 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 MDC1Q14676 2089 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 TRBC2A0A5B9 178 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 TRIM64A6NGJ6 449 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 HPRP00739 348 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 RB1P06400 928 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 CHRM5P08912 532 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 HSMCR30P0CW71 290 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 C7P10643 843 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 DUSP2Q05923 314 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 NPRL3Q12980 569 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 DCTN2Q13561 401 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 SYPL1Q16563 259 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 TPRG1LQ5T0D9 272 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ZNF761Q86XN6 746 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 LACC1Q8IV20 430 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 CCDC103Q8IW40 242 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 DCUN1D3Q8IWE4 304 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 LAS2Q8IYD9 372 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ENTHD1Q8IYW4 607 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 CLIP4Q8N3C7 705 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 METTL4Q8N3J2 472 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 LEMD2Q8NC56 503 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 SIMC1Q8NDZ2 872 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 OR10G2Q8NGC3 310 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.43□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D15Q8TC07 691 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 FAR1Q8WVX9 515 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 XAGE5Q8WWM1 108 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 TSACCQ96A04 125 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 TEFMQ96QE5 360 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 IL4I1Q96RQ9 567 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ZNF717Q9BY31 904 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 TUBA8Q9NY65 449 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 LMCD1Q9NZU5 365 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 DOLKQ9UPQ8 538 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 A0A1W2PPV9 198 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 NPIPB8E9PQR5 432 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 PSMD11O00231 422 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 RNASET2O00584 256 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 PI15O43692 258 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 GPR37L1O60883 481 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 BCAS1O75363 584 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 TNFRSF21O75509 655 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 WBP4O75554 376 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 COL9A1P20849 921 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 SSR2P43308 183 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ITGA1P56199 1179 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 HOXC5Q00444 222 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 GPR19Q15760 415 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 CYP2A13Q16696 494 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ANXA8L1Q5VT79 327 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 KHDRBS2Q5VWX1 349 aaKnown RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 GTF2IRD2BQ6EKJ0 949 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ZNF793Q6ZN11 406 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 SLC16A12Q6ZSM3 486 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 GTF2IRD2Q86UP8 949 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 FAM9CQ8IZT9 166 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 SLC15A4Q8N697 577 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 OR4E2Q8NGC2 313 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 OR5K2Q8NHB8 316 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 APH1BQ8WW43 257 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 PATE1Q8WXA2 126 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ITM2CQ9NQX7 267 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 C1GALT1Q9NS00 363 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 USE1Q9NZ43 259 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms