RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 IGHV5-10-1A0A0J9YXX1 117 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 D6RAR5 112 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 H0YGG7 62 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 SAP18O00422 153 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 P2RX6O15547 441 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 NDUFS4O43181 175 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 PCDH7O60245 1069 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 CTSBP07858 339 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 GSTM2P28161 218 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 ARF3P61204 181 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 HYAL2Q12891 473 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 KCNAB1Q14722 419 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 TAF11Q15544 211 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 PGS1Q32NB8 556 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 CCDC157Q569K6 752 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 CYP2R1Q6VVX0 501 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 DGLUCYQ7Z3D6 616 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 ASPGQ86U10 573 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 PROSER1Q86XN7 944 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 TRPV3Q8NET8 790 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 THAP11Q96EK4 314 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 F2RL3Q96RI0 385 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 AP4S1Q9Y587 144 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 PCDHB3Q9Y5E6 796 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 SPEGQ15772 3267 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 SCAMP2O15127 329 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 ARPC2O15144 300 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 PEX1O43933 1283 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 SEMA3DO95025 777 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 LRATO95237 230 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 COX7A2P14406 83 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 HOXB9P17482 250 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 ATP6V1B2P21281 511 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 GABRA4P48169 554 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 TRPC1P48995 793 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 MTPNP58546 118 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 KHDRBS2Q5VWX1 349 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 COMMD6Q7Z4G1 85 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 MCATQ8IVS2 390 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 MSRB3Q8IXL7 192 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 TMEM132CQ8N3T6 1108 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 KLHL6Q8WZ60 621 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 TM4SF19Q96DZ7 209 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 SLC41A2Q96JW4 573 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 CCDC74BQ96LY2 380 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 PRPF18Q99633 342 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 DPYSL5Q9BPU6 564 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 EFHD1Q9BUP0 239 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 ZNF768Q9H5H4 540 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 PDE7BQ9NP56 450 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 SLC25A37Q9NYZ2 338 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 AHSPQ9NZD4 102 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 EGFL7Q9UHF1 273 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 RIMS3Q9UJD0 308 aa17.82■□□□□ 0.44
EXOSC3-201ENST00000327304 ACADSP16219 412 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 HPCAL1P37235 193 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 ARL4DP49703 201 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 VSX2P58304 361 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 HSD11B2P80365 405 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 PLIN5Q00G26 463 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 ZNF763Q0D2J5 394 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 SPIDRQ14159 915 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 SELPLGQ14242 412 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 CLPPQ16740 277 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 DEPDC1Q5TB30 811 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 IFNEQ86WN2 208 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 SLITRK4Q8IW52 837 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 RCBTB1Q8NDN9 531 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 GFM2Q969S9 779 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 ZNF184Q99676 751 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 ECSITQ9BQ95 431 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 REXO4Q9GZR2 422 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 CHRNA10Q9GZZ6 450 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 KLHL31Q9H511 634 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 ARMC1Q9NVT9 282 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 MAGEL2Q9UJ55 1249 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 FAM186AA6NE01 2351 aa17.81■□□□□ 0.44
EXOSC3-201ENST00000327304 GNG14A0A1W2PPG7 69 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 LRIT2A6NDA9 550 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 AKAP10O43572 662 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 EIF2S1P05198 315 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 ATP6V1C1P21283 382 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 LRRC74AQ0VAA2 488 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 HKDC1Q2TB90 917 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 ZC3H12BQ5HYM0 836 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 TOR1AIP1Q5JTV8 583 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 OGFRL1Q5TC84 451 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 OR4F3Q6IEY1 312 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 ARHGAP22Q7Z5H3 698 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 D2HGDHQ8N465 521 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 TNIP2Q8NFZ5 429 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 OR7A2PQ8NGA2 310 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 NT5CQ8TCD5 201 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 RERGQ96A58 199 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 ZNF583Q96ND8 569 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 GBP5Q96PP8 586 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 KLHL4Q9C0H6 718 aa17.8■□□□□ 0.44
EXOSC3-201ENST00000327304 CCM2LQ9NUG4 571 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms