RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 MBD1Q9UIS9 605 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HCN4Q9Y3Q4 1203 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ISM1B1AKI9 464 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 B8ZZF3 427 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 TLR4O00206 839 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 GAPDHSO14556 408 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 TPST2O60704 377 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 MTX2O75431 263 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 MYCP01106 439 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 CD9P21926 228 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SP3Q02447 781 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 IRF8Q02556 426 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 MTAPQ13126 283 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 TARDBPQ13148 414 aaKnown RBP eCLIP9.24□□□□□ -0.931e-12■■■■■ 41.8
PTPRA-202ENST00000318266 ZNF177Q13360 481 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ATAT1Q5SQI0 421 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF57Q68EA5 555 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 B3GLCTQ6Y288 498 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 PLCZ1Q86YW0 608 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 C1orf52Q8N6N3 182 aaKnown RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SLC37A3Q8NCC5 494 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 OR4M2Q8NGB6 313 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 OR52P1PQ8NH57 321 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 CSGALNACT1Q8TDX6 532 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 KLHL6Q8WZ60 621 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SLC25A46Q96AG3 418 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 MSANTD3Q96H12 275 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SUSD3Q96L08 255 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 NELL2Q99435 816 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ACER3Q9NUN7 267 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 EVA1BQ9NVM1 165 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 PLEKHB1Q9UF11 243 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 PATJQ8NI35 1801 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HYKKA2RU49 373 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SAP18O00422 153 aaKnown RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 KDELR3O43731 214 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HPGDSO60760 199 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ETHE1O95571 254 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 C1QBP02746 253 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 F11P03951 625 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ANXA4P09525 319 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HIST1H2AGP0C0S8 130 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ATF4P18848 351 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 TNNI3P19429 210 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HIST1H2ADP20671 130 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 CSTF2P33240 577 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SOAT1P35610 550 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HMGCLP35914 325 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 PTPN5P54829 565 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ARF5P84085 180 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SCARB2Q14108 478 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 POU4F3Q15319 338 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF284Q2VY69 593 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 CRTC2Q53ET0 693 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 TYW3Q6IPR3 259 aaKnown RBP9.24□□□□□ -0.93
PTPRA-202ENST00000318266 CNIH2Q6PI25 160 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 SHFQ7M4L6 423 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 GRAMD2AQ8IUY3 354 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 VRK3Q8IV63 474 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 TCTE3Q8IZS6 198 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 PGBD3Q8N328 593 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 LSMEM1Q8N8F7 131 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HIST1H2AHQ96KK5 128 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 QRFPRQ96P65 431 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 HIST1H2AJQ99878 128 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 H2AFJQ9BTM1 129 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 RACGAP1Q9H0H5 632 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 ZFYVE1Q9HBF4 777 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 B3GAT2Q9NPZ5 323 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 GPATCH2Q9NW75 528 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 TMEM161AQ9NX61 479 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 PADI3Q9ULW8 664 aa9.24□□□□□ -0.93
PTPRA-202ENST00000318266 CCDC88CQ9P219 2028 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 TRBV4-1A0A0J9YWV2 114 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 A0A1B0GVC2 190 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 MGAT4DA6NG13 374 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 A6NIN4 97 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 PDE9AO76083 593 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ENPP1P22413 925 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CPN2P22792 545 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 PTGS2P35354 604 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 BNC1Q01954 994 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF91Q05481 1191 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 C1DQ13901 141 aaKnown RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CCL14Q16627 93 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 XKR6Q5GH73 641 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 LRRC73Q5JTD7 316 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CERS6Q6ZMG9 384 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ANKS3Q6ZW76 656 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 TSPAN33Q86UF1 283 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 TRIM69Q86WT6 500 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 MEX3DQ86XN8 651 aaKnown RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 NPAS3Q8IXF0 933 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 FAM9CQ8IZT9 166 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 FAM46DQ8NEK8 389 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 OR6C4Q8NGE1 309 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 FOXJ1Q92949 421 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 MED8Q96G25 268 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms