RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 LANCL3Q6ZV70 420 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 TRIM46Q7Z4K8 759 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 PPP1R32Q7Z5V6 425 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 CLYBLQ8N0X4 340 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 METTL4Q8N3J2 472 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 C1orf52Q8N6N3 182 aaKnown RBP8.57□□□□□ -1.04
PDE4D-201ENST00000309641 CHTF18Q8WVB6 975 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 TWIST2Q8WVJ9 160 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 SREK1Q8WXA9 508 aaKnown RBP8.57□□□□□ -1.04
PDE4D-201ENST00000309641 ZNF75CPQ92670 426 aaPredicted RBP8.57□□□□□ -1.04
PDE4D-201ENST00000309641 TSLPQ969D9 159 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 TBC1D20Q96BZ9 403 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 PPP1R36Q96LQ0 422 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 CRB3Q9BUF7 120 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 ACBD3Q9H3P7 528 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 DDX31Q9H8H2 851 aaKnown RBP8.57□□□□□ -1.04
PDE4D-201ENST00000309641 MANSC1Q9H8J5 431 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 COPS7BQ9H9Q2 264 aaPredicted RBP8.57□□□□□ -1.04
PDE4D-201ENST00000309641 PNPOQ9NVS9 261 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 PSD3Q9NYI0 1048 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 VPS29Q9UBQ0 182 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 C3orf18Q9UK00 162 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 ATG4BQ9Y4P1 393 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 HS3ST3B1Q9Y662 390 aa8.57□□□□□ -1.04
PDE4D-201ENST00000309641 SMG1Q96Q15 3661 aaKnown RBP8.57□□□□□ -1.04
PDE4D-201ENST00000309641 ATP6AP2A0A1C7CYW4 349 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CDC14CA4D256 554 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 TMEM114B3SHH9 223 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 SNNO75324 88 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ATP6AP2O75787 350 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 SEMA3DO95025 777 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 FHP07954 510 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 RNH1P13489 461 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 MAOAP21397 527 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 GRK2P25098 689 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 SERPINB5P36952 375 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 TMPRSS3P57727 454 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 RHAGQ02094 409 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CDC20Q12834 499 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CSTF3Q12996 717 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ATP1A4Q13733 1029 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 UGT8Q16880 541 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 SPDYAQ5MJ70 313 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 C10orf62Q5T681 223 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 C18orf63Q68DL7 685 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 MRM1Q6IN84 353 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 KIRREL2Q6UWL6 708 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 SRFBP1Q8NEF9 429 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 C11orf24Q96F05 449 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 EML4Q9HC35 981 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 SLCO1B3Q9NPD5 702 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 INTS9Q9NV88 658 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 TEX10Q9NXF1 929 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 MARCOQ9UEW3 520 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 PADI2Q9Y2J8 665 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ASB4Q9Y574 426 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CLDN16Q9Y5I7 305 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ATRXP46100 2492 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 KALRNO60229 2985 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 IGHV3-20A0A0C4DH32 117 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 A0A1W2PR48 441 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 A0A1W2PS29 197 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 GLOD5A6NK44 160 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ZNF891A8MT65 544 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 DYNC1I1O14576 645 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 HSD3B1P14060 373 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 MMP11P24347 488 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 HSD3B2P26439 372 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 EMP2P54851 167 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 RAB38P57729 211 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 OCRLQ01968 901 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ID2Q02363 134 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 TGM3Q08188 693 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CHAF1BQ13112 559 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 SSPNQ14714 243 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 PDCD2Q16342 344 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CPZQ66K79 652 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CLNKQ7Z7G1 428 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 MRGPREQ86SM8 312 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 DDIASQ8IXT1 998 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ZCCHC7Q8N3Z6 543 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 EFCAB3Q8N7B9 438 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 GBP7Q8N8V2 638 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 CENPKQ9BS16 269 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 EFHD1Q9BUP0 239 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 EBPLQ9BY08 206 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 ILKAPQ9H0C8 392 aaPredicted RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 PRORYQ9H606 182 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 NECTIN3Q9NQS3 549 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 NXT1Q9UKK6 140 aaKnown RBP8.56□□□□□ -1.04
PDE4D-201ENST00000309641 RAP2CQ9Y3L5 183 aa8.56□□□□□ -1.04
PDE4D-201ENST00000309641 IGSF10Q6WRI0 2623 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 A0A088AWK7 358 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 SERTM1A2A2V5 107 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 PSMD12O00232 456 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-201ENST00000309641 SOCS6O14544 535 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 PROM1O43490 865 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 ATP8B1O43520 1251 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 LDB3O75112 727 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 DNAJB5O75953 348 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms