RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 PKD1L2Q7Z442 2459 aa21.08■□□□□ 0.96
HOXD4-201ENST00000306324 SKAP2O75563 359 aaPredicted RBP21.07■□□□□ 0.96
HOXD4-201ENST00000306324 KLK1P06870 262 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 HEXBP07686 556 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 UMODP07911 640 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 FHP07954 510 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 LINC00032P0C843 101 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 IL10P22301 178 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 CXADRP78310 365 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 TBL3Q12788 808 aaKnown RBP21.07■□□□□ 0.96
HOXD4-201ENST00000306324 UGT3A2Q3SY77 523 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 ATP1A1-AS1Q5TC04 95 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 PAGE2Q7Z2X7 111 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 COMMD6Q7Z4G1 85 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 C1orf52Q8N6N3 182 aaKnown RBP21.07■□□□□ 0.96
HOXD4-201ENST00000306324 MAPKAP1Q9BPZ7 522 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 TUBB1Q9H4B7 451 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.07■□□□□ 0.96
HOXD4-201ENST00000306324 ARHGAP10A1A4S6 786 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 CDC14CA4D256 554 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 OR2W5A6NFC9 320 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 IDSB3KWA1 339 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 FAM227AF5H4B4 570 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 K7ENP7 123 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 SLC28A1O00337 649 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 PIP5K1BO14986 540 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 B4GALT2O60909 372 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 RPL14P50914 215 aaKnown RBP21.07■□□□□ 0.96
HOXD4-201ENST00000306324 EMP2P54851 167 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 RAB38P57729 211 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 ACSM2AQ08AH3 577 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 VAC14Q08AM6 782 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 SSPNQ14714 243 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 ACSM2BQ68CK6 577 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 INO80CQ6PI98 192 aaPredicted RBP21.07■□□□□ 0.96
HOXD4-201ENST00000306324 ZCCHC7Q8N3Z6 543 aaKnown RBP21.07■□□□□ 0.96
HOXD4-201ENST00000306324 EFCAB3Q8N7B9 438 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 FAM47BQ8NA70 645 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 LRRC8CQ8TDW0 803 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 APIPQ96GX9 242 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 LYRM4Q9HD34 91 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 SPACA6W5XKT8 324 aa21.07■□□□□ 0.96
HOXD4-201ENST00000306324 A0A0A6YYD5 115 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 RGS14O43566 566 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 SNNO75324 88 aaPredicted RBP21.06■□□□□ 0.96
HOXD4-201ENST00000306324 FURINP09958 794 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 JAK1P23458 1154 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 CDC20Q12834 499 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 UGT8Q16880 541 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 SPIN4Q56A73 249 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 CCNYL2Q5T2Q4 361 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 FAAH2Q6GMR7 532 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 RAB43Q86YS6 212 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 CHTF18Q8WVB6 975 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 CSF3RQ99062 836 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 VN1R1Q9GZP7 353 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 LANCL2Q9NS86 450 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 SEMA3GQ9NS98 782 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 KCMF1Q9P0J7 381 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 ADAM29Q9UKF5 820 aa21.06■□□□□ 0.96
HOXD4-201ENST00000306324 EPG5Q9HCE0 2579 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 KLF11O14901 512 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 TMPRSS11DO60235 418 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 FAM58BPP0C7Q3 252 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 CPN2P22792 545 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 TPP2P29144 1249 aaPredicted RBP21.05■□□□□ 0.96
HOXD4-201ENST00000306324 HNRNPH2P55795 449 aaKnown RBP21.05■□□□□ 0.96
HOXD4-201ENST00000306324 PDCD2Q16342 344 aaPredicted RBP21.05■□□□□ 0.96
HOXD4-201ENST00000306324 TUBB8Q3ZCM7 444 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 RNF165Q6ZSG1 346 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 GPR180Q86V85 440 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 ARFGAP2Q8N6H7 521 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 ADAMTS18Q8TE60 1221 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 PNPOQ9NVS9 261 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 LYARQ9NX58 379 aaKnown RBP21.05■□□□□ 0.96
HOXD4-201ENST00000306324 PHF11Q9UIL8 331 aa21.05■□□□□ 0.96
HOXD4-201ENST00000306324 MRPS33Q9Y291 106 aaKnown RBP21.05■□□□□ 0.96
HOXD4-201ENST00000306324 RSL1D1O76021 490 aaKnown RBP21.04■□□□□ 0.96
HOXD4-201ENST00000306324 RECKO95980 971 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 MMP11P24347 488 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 MAPK12P53778 367 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 NR6A1Q15406 480 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 CRTC2Q53ET0 693 aaPredicted RBP21.04■□□□□ 0.96
HOXD4-201ENST00000306324 C19orf48Q6RUI8 117 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 KIRREL3Q8IZU9 778 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 OR2T11Q8NH01 316 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 ADAMTS17Q8TE56 1095 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 CRELD1Q96HD1 420 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 HAO1Q9UJM8 370 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 ATG4BQ9Y4P1 393 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 CCL27Q9Y4X3 112 aa21.04■□□□□ 0.96
HOXD4-201ENST00000306324 CYR61O00622 381 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 PCDH7O60245 1069 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 SEC22BO75396 215 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 IGHEP01854 428 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 EFNA3P52797 238 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 OCRLQ01968 901 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 MRM1Q6IN84 353 aaKnown RBP21.03■□□□□ 0.96
HOXD4-201ENST00000306324 Q6ZSR9 355 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 TMEM52Q8NDY8 209 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms