RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 CEP78Q5JTW2 689 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 KIAA1161Q6NSJ0 714 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 FNDC5Q8NAU1 212 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 KCNJ9Q92806 393 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 FAM162AQ96A26 154 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 ESAMQ96AP7 390 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 IRF2BPLQ9H1B7 796 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 RIBC2Q9H4K1 309 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 TFB2MQ9H5Q4 396 aaKnown RBP12.1□□□□□ -0.47
PRPF6-201ENST00000266079 RAD18Q9NS91 495 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 WSB2Q9NYS7 404 aaPredicted RBP12.1□□□□□ -0.47
PRPF6-201ENST00000266079 NEUROG3Q9Y4Z2 214 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 U3KQV3 271 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 IGHV1OR15-9A0A0B4J2B8 117 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 SGTAO43765 313 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 PRDX3P30048 256 aaKnown RBP12.1□□□□□ -0.47
PRPF6-201ENST00000266079 LIPAP38571 399 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 RPL6Q02878 288 aaKnown RBP12.1□□□□□ -0.47
PRPF6-201ENST00000266079 SMN1Q16637 294 aaKnown RBP12.1□□□□□ -0.47
PRPF6-201ENST00000266079 SYVN1Q86TM6 617 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 CYP4Z1Q86W10 505 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 BPHLQ86WA6 291 aaPredicted RBP12.1□□□□□ -0.47
PRPF6-201ENST00000266079 FBXO39Q8N4B4 442 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 SPERTQ8NA61 448 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 OR52E4Q8NGH9 312 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 MKLN1Q9UL63 735 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 PRELID1Q9Y255 219 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 GRIP1Q9Y3R0 1128 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 PCDHB1Q9Y5F3 818 aa12.1□□□□□ -0.47
PRPF6-201ENST00000266079 SUPT3HB4E1H0 165 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 SCELO95171 688 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 IGHV4-34P06331 123 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 CYP4B1P13584 511 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 BCKDHBP21953 392 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PLIN5Q00G26 463 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 DPTQ07507 201 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PRAMEF14Q5SWL7 426 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 LYPLAL1Q5VWZ2 237 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 ZBTB2Q8N680 514 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 OR10A6Q8NH74 314 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 EDAQ92838 391 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 SIGLEC11Q96RL6 698 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 AASDHPPTQ9NRN7 309 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 RAPGEFL1Q9UHV5 662 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PLEKHM1Q9Y4G2 1056 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 GMPPBQ9Y5P6 360 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PEX16Q9Y5Y5 336 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 TDRD6O60522 2096 aaKnown RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PLXNB3Q9ULL4 1909 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 CXCR6O00574 342 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 DFNA5O60443 496 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 GUCA1CO95843 209 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 RPS17P08708 135 aaKnown RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PDHA2P29803 388 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 CTSKP43235 329 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 DGKQP52824 942 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 IL2P60568 153 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 MAD2L1BPQ15013 274 aaPredicted RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 NXNL2Q5VZ03 156 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 NEK5Q6P3R8 708 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 ZNF547Q8IVP9 402 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 CFAP206Q8IYR0 622 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PSD4Q8NDX1 1056 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 IPCEF1Q8WWN9 437 aaPredicted RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 DMRTB1Q96MA1 342 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 APOL4Q9BPW4 351 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 OSGEPL1Q9H4B0 414 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 MAGIXQ9H6Y5 334 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 TRIM39Q9HCM9 518 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PLSCR3Q9NRY6 295 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 PAQR5Q9NXK6 330 aaPredicted RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 CCDC59Q9P031 241 aaKnown RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 EIF2B4Q9UI10 523 aaKnown RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 ZNF225Q9UK10 706 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 SNX6Q9UNH7 406 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 RNF6Q9Y252 685 aa12.09□□□□□ -0.47
PRPF6-201ENST00000266079 CFAP20Q9Y6A4 193 aaKnown RBP12.09□□□□□ -0.47
PRPF6-201ENST00000266079 IGLV3-16A0A075B6K0 115 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 PNMA8CA0A1B0GUJ8 204 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 ELOVL7A1L3X0 281 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 IFRD1O00458 451 aaPredicted RBP12.08□□□□□ -0.47
PRPF6-201ENST00000266079 AP3D1O14617 1153 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 CAPN5O15484 640 aaPredicted RBP12.08□□□□□ -0.47
PRPF6-201ENST00000266079 SEMA3DO95025 777 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 GADD45AP24522 165 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 IFNA8P32881 189 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 FNTBP49356 437 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 GTF2H3Q13889 308 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 DUSP7Q16829 419 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 SYTL3Q4VX76 610 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 MACC1Q6ZN28 852 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 TSACCQ96A04 125 aaPredicted RBP12.08□□□□□ -0.47
PRPF6-201ENST00000266079 VPS35Q96QK1 796 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 THUMPD3Q9BV44 507 aaKnown RBP12.08□□□□□ -0.47
PRPF6-201ENST00000266079 SGK2Q9HBY8 427 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 VAPAQ9P0L0 249 aa12.08□□□□□ -0.47
PRPF6-201ENST00000266079 DHRS7Q9Y394 339 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms