RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FOPNLQ96NB1 174 aa21.63■■□□□ 1.05
MCF2L-201ENST00000261963 SIGLEC11Q96RL6 698 aa21.63■■□□□ 1.05
MCF2L-201ENST00000261963 PDP1Q9P0J1 537 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-201ENST00000261963 A8MV72 311 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-201ENST00000261963 TMEM229AB2RXF0 380 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 H3BM21 787 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 KPNA3O00505 521 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-201ENST00000261963 FKBP9O95302 570 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 RPLP0P05388 317 aaKnown RBP21.62■■□□□ 1.05
MCF2L-201ENST00000261963 HOXA9P31269 272 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 VASPP50552 380 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-201ENST00000261963 TBPL1P62380 186 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 C19orf57Q0VDD7 668 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 BCL7AQ4VC05 210 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 ZNF385BQ569K4 471 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 IQCF2Q8IXL9 164 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 PSD4Q8NDX1 1056 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 MAL2Q969L2 176 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 C7orf34Q96L11 122 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 TTYH2Q9BSA4 534 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 PLSCR3Q9NRY6 295 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 RASSF1Q9NS23 344 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 TAS2R9Q9NYW1 312 aa21.62■■□□□ 1.05
MCF2L-201ENST00000261963 NDRG4Q9ULP0 352 aaKnown RBP21.62■■□□□ 1.05
MCF2L-201ENST00000261963 K7ESM1 405 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 M0R082 166 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 CYP17A1P05093 508 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 SRPRAP08240 638 aaKnown RBP21.61■■□□□ 1.05
MCF2L-201ENST00000261963 EPCAMP16422 314 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 CEBPBP17676 345 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 SLC15A1P46059 708 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 DGKGP49619 791 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 ITGA1P56199 1179 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 RGNQ15493 299 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 MED27Q6P2C8 311 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 GRASPQ7Z6J2 395 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-201ENST00000261963 HORMAD1Q86X24 394 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 JPH3Q8WXH2 748 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-201ENST00000261963 MYOCQ99972 504 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 SAMHD1Q9Y3Z3 626 aaKnown RBP21.61■■□□□ 1.05
MCF2L-201ENST00000261963 AP3D1O14617 1153 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 PCDH7O60245 1069 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 SEMA3DO95025 777 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 NPPBP16860 134 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 EPHA2P29317 976 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 ETV6P41212 452 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 MAPK9P45984 424 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 GPR50Q13585 617 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 PROX2Q3B8N5 592 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 FBXO15Q8NCQ5 510 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-201ENST00000261963 SIRT5Q9NXA8 310 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 LYVE1Q9Y5Y7 322 aa21.61■■□□□ 1.05
MCF2L-201ENST00000261963 GNG14A0A1W2PPG7 69 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 MGAT4DA6NG13 374 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 GCM2O75603 506 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-201ENST00000261963 TIGD6Q17RP2 521 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 ANXA8L1Q5VT79 327 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 ZNF517Q6ZMY9 492 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-201ENST00000261963 POF1BQ8WVV4 589 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 SPATA9Q9BWV2 254 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 EPHX3Q9H6B9 360 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 PRDM8Q9NQV8 689 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 GIMAP4Q9NUV9 329 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 C14orf119Q9NWQ9 140 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 LOC100506127A0A0U1RQW1 187 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 ZNF8P17098 575 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-201ENST00000261963 RRM2P31350 389 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 IFNA8P32881 189 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 KCNJ10P78508 379 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 TBRG1Q3YBR2 411 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 ZNF697Q5TEC3 545 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 CFAP206Q8IYR0 622 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 VPS37AQ8NEZ2 397 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.6■■□□□ 1.05
MCF2L-201ENST00000261963 TPD52L3Q96J77 140 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 CCDC32Q9BV29 185 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 OR2AG1Q9H205 316 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 TRIM39Q9HCM9 518 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 RPRD1BQ9NQG5 326 aaKnown RBP21.6■■□□□ 1.05
MCF2L-201ENST00000261963 SH3BP4Q9P0V3 963 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 VPS4AQ9UN37 437 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 PRELID1Q9Y255 219 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 INSL6Q9Y581 213 aa21.6■■□□□ 1.05
MCF2L-201ENST00000261963 AQP1P29972 269 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 IRS1P35568 1242 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 SLC46A3Q7Z3Q1 461 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 NRARPQ7Z6K4 114 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 RAB43Q86YS6 212 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 NAGSQ8N159 534 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 SPERTQ8NA61 448 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 WDR34Q96EX3 536 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 PRM3Q9NNZ6 103 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 IL23AQ9NPF7 189 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 GPATCH2Q9NW75 528 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 WDR70Q9NW82 654 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 THUMPD1Q9NXG2 353 aaKnown RBP21.59■■□□□ 1.05
MCF2L-201ENST00000261963 CXXC1Q9P0U4 656 aaPredicted RBP21.59■■□□□ 1.05
MCF2L-201ENST00000261963 PCM1Q15154 2024 aa21.59■■□□□ 1.05
MCF2L-201ENST00000261963 RNASET2O00584 256 aaKnown RBP21.59■■□□□ 1.05
MCF2L-201ENST00000261963 DNTTP04053 509 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms