RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 LRRC32Q14392 662 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 TBCEQ15813 527 aaPredicted RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 SDE2Q6IQ49 451 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 RAB43Q86YS6 212 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 UBQLNLQ8IYU4 475 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 COL21A1Q96P44 957 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 SIGLEC11Q96RL6 698 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 YME1L1Q96TA2 773 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 MACROD1Q9BQ69 325 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 QRSL1Q9H0R6 528 aaKnown RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 BEX1Q9HBH7 125 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 DNAJC11Q9NVH1 559 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 PCDHB11Q9Y5F2 797 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 A0A1W2PQL4 384 aaPredicted RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 ZSCAN5BA6NJL1 495 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 TLX2O43763 284 aaPredicted RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 HBQ1P09105 142 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 CHRNB1P11230 501 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 CKBP12277 381 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 SOX18P35713 384 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 SPAM1P38567 509 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 DSC1Q08554 894 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 MRPL58Q14197 206 aaKnown RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 P2RY14Q15391 338 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 CEP78Q5JTW2 689 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 IL20RBQ6UXL0 311 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 TECPR1Q7Z6L1 1165 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 SERPINA11Q86U17 422 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 HJURPQ8NCD3 748 aaPredicted RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 ATP6V1C2Q8NEY4 427 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 GATAD2BQ8WXI9 593 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 C1GALT1C1Q96EU7 318 aa12.43□□□□□ -0.42
SNX1-201ENST00000261889 FUBP3Q96I24 572 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX1-201ENST00000261889 CXXC1Q9P0U4 656 aaPredicted RBP12.43□□□□□ -0.42
SNX1-201ENST00000261889 SCN2AQ99250 2005 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 KCNE1BA0A087WTH5 132 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 ARHGEF33A8MVX0 844 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 HRO43593 1189 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 BCHEP06276 602 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 CKMP06732 381 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 KLK1P06870 262 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 TSPAN19P0C672 248 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 GPX2P18283 190 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 PRPS1L1P21108 318 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 SDC2P34741 201 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 RAE1P78406 368 aaKnown RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 PTSQ03393 145 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 CDC20Q12834 499 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 HSPB3Q12988 150 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 PIN1Q13526 163 aaPredicted RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 SLC24A5Q71RS6 500 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 DEFB128Q7Z7B8 93 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 THOC6Q86W42 341 aaKnown RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 ATCAYQ86WG3 371 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 NPAS3Q8IXF0 933 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 FAM20CQ8IXL6 584 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 KIAA1958Q8N8K9 716 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 C11orf65Q8NCR3 313 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 DHRS1Q96LJ7 313 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 TTTY10Q9BZA0 68 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 RACGAP1Q9H0H5 632 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 NLKQ9UBE8 527 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 EXO1Q9UQ84 846 aaKnown RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 LOC102723532A0A0G2JNH3 316 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 GLOD5A6NK44 160 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 PLK4O00444 970 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 TNFRSF21O75509 655 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 PRKRAO75569 313 aaKnown RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 LBX1P52954 281 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 LIM2P55344 173 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 TAS2R50P59544 299 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 FADDQ13158 208 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 TCTN1Q2MV58 587 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 SMU1Q2TAY7 513 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 SYNPOQ8N3V7 929 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 MINDY2Q8NBR6 621 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 IPCEF1Q8WWN9 437 aaPredicted RBP12.42□□□□□ -0.42
SNX1-201ENST00000261889 NEIL2Q969S2 332 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 CMTM7Q96FZ5 175 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 MAN2B2Q9Y2E5 1009 aa12.42□□□□□ -0.42
SNX1-201ENST00000261889 ANKDD1BA6NHY2 528 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 TSPAN6O43657 245 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 SEMA7AO75326 666 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 CSO75390 466 aaKnown RBP12.41□□□□□ -0.42
SNX1-201ENST00000261889 SERPIND1P05546 499 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 CCL5P13501 91 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 MAN2A2P49641 1150 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ACLYP53396 1101 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 PRKAG1P54619 331 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 TTLL9Q3SXZ7 439 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 C5orf22Q49AR2 442 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 ATAT1Q5SQI0 421 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 LACC1Q8IV20 430 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 KCNK12Q9HB15 430 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 PEX16Q9Y5Y5 336 aa12.41□□□□□ -0.42
SNX1-201ENST00000261889 SPIN1Q9Y657 262 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms