RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SLC38A4Q969I6 547 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 YIPF6Q96EC8 236 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 NEDD4LQ96PU5 975 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 PALMDQ9NP74 551 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 A0A1W2PS29 197 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 OR2A25A4D2G3 310 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ZW10O43264 779 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 NUAK1O60285 661 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ENTPD6O75354 484 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 CLEC2LP0C7M8 214 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ADORA3P0DMS8 318 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TIA1P31483 386 aaKnown RBP eCLIP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ERVFC1P60507 584 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 POLR2LP62875 67 aaKnown RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TARDBPQ13148 414 aaKnown RBP eCLIP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 UBE2UQ5VVX9 321 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 CCBE1Q6UXH8 406 aaPredicted RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 Q6ZNB5 142 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 GLYATL1Q969I3 302 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TESCQ96BS2 214 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ZNF226Q9NYT6 803 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TBC1D14Q9P2M4 693 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 BACE2Q9Y5Z0 518 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 GSAPA4D1B5 854 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TLX2O43763 284 aaPredicted RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TGFBR2P37173 567 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 BUD31P41223 144 aaPredicted RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TM4SF4P48230 202 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ELP6Q0PNE2 266 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 SPATS1Q496A3 300 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ATAD3BQ5T9A4 648 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 LYPLAL1Q5VWZ2 237 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 RD3Q7Z3Z2 195 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 SLC39A11Q8N1S5 342 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 GHDCQ8N2G8 530 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 PARP16Q8N5Y8 322 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 L3MBTL4Q8NA19 623 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 WDR20Q8TBZ3 569 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ZNF296Q8WUU4 475 aaPredicted RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 MGLLQ99685 303 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 RDH14Q9HBH5 336 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 SLC28A2O43868 658 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 PCDH8O95206 1070 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 KRT75O95678 551 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 SLC6A11P48066 632 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 PTPN5P54829 565 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 GABARAPL2P60520 117 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 C10orf62Q5T681 223 aaPredicted RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TMC5Q6UXY8 1006 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 VN1R2Q8NFZ6 395 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 IRF7Q92985 503 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 TTTY10Q9BZA0 68 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 CEP44Q9C0F1 390 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 ELAC1Q9H777 363 aaKnown RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 NMNAT1Q9HAN9 279 aaPredicted RBP14.41□□□□□ -0.1
EFNB1-201ENST00000204961 MAN2B2Q9Y2E5 1009 aa14.41□□□□□ -0.1
EFNB1-201ENST00000204961 PCCBP05166 539 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 HNMTP50135 292 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 CSTF3Q12996 717 aaKnown RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 RAB33AQ14088 237 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 FNDC3BQ53EP0 1204 aaKnown RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 SPANXN2Q5MJ10 180 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 CAPN13Q6MZZ7 669 aaPredicted RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 PRSS48Q7RTY5 328 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 AKAP14Q86UN6 197 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 NLGN4YQ8NFZ3 816 aaPredicted RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 GANCQ8TET4 914 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 UBASH3BQ8TF42 649 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 RNF31Q96EP0 1072 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 TMEM175Q9BSA9 504 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 MAGIXQ9H6Y5 334 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 CXorf36Q9H7Y0 433 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 FAM120CQ9NX05 1096 aaKnown RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 PIPSLA2A3N6 862 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 GFYI3L273 518 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 AP2A2O94973 939 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 HOXB3P14651 431 aaPredicted RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 NPPBP16860 134 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 MAT2AP31153 395 aaKnown RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 ITGA1P56199 1179 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 RAB15P59190 212 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 SYPL1Q16563 259 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 PROX2Q3B8N5 592 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 SYT6Q5T7P8 510 aaPredicted RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 PARS2Q7L3T8 475 aaKnown RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 ABI3BPQ7Z7G0 1075 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 C12orf40Q86WS4 652 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 ARMC8Q8IUR7 673 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 HORMAD2Q8N7B1 307 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 C16orf78Q8WTQ4 265 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 RDH12Q96NR8 316 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 SLX1AQ9BQ83 275 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 MMP28Q9H239 520 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 TP63Q9H3D4 680 aaPredicted RBP14.4□□□□□ -0.1
EFNB1-201ENST00000204961 TDP1Q9NUW8 608 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 PCDHGA3Q9Y5H0 932 aa14.4□□□□□ -0.1
EFNB1-201ENST00000204961 DSCR3O14972 297 aa14.4□□□□□ -0.11
EFNB1-201ENST00000204961 KCNK2O95069 426 aa14.4□□□□□ -0.11
EFNB1-201ENST00000204961 TPGS2Q68CL5 300 aa14.4□□□□□ -0.11
EFNB1-201ENST00000204961 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.4□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms