RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 NaaaQ9D7V9 362 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Gm17190V9GX38 357 aa12.9□□□□□ -0.34
Nup88-201ENSMUST00000035283 Slfn3A0A1L1STQ7 640 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm2956E9PVJ0 216 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm5796E9Q7M8 205 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rhox13F6YCR7 232 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zfp846G3X996 541 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm3629K7N6Y2 205 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm10340K7N708 205 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm8108K7N734 216 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn2r12L7N217 831 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 FurinP23188 793 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Dusp5Q1HL35 384 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Fcho2Q3UQN2 809 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Stard3Q61542 446 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zfp184Q7TSH9 737 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Nipal3Q8BGN5 410 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Mon1bQ8BMQ8 553 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tma7Q8K003 64 aaKnown RBP12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 TrhdeQ8K093 1025 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 McatQ8R3F5 381 aaKnown RBP12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Chchd4Q8VEA4 139 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tmem98Q91X86 226 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cyp2j9Q924D1 502 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Snx20Q9D2Y5 313 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Stx11Q9D3G5 287 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 AcoxlQ9DBS4 632 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Orc6Q9WUJ8 262 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Map2k5Q9WVS7 448 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Celf2Q9Z0H4 508 aaKnown RBP12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Fads2Q9Z0R9 444 aaKnown RBP12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Nlrc5C3VPR6 1915 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 AccsA2AIG8 502 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Trmt1lA2RSY6 728 aaKnown RBP12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tex264E9Q137 309 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zfp995E9Q6M3 437 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 A430033K04RikE9Q8G5 680 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 MgllO35678 303 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Mpzl2O70255 215 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 JtbO88824 146 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 P01878 344 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Serpina3cP29621 417 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Bcl6P41183 707 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rph3aP47708 681 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Nat3P50296 290 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Adra1bP97717 514 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cpt1aP97742 773 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Q3U7U4 132 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 CrhbpQ60571 322 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rapgefl1Q68EF8 662 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gramd2bQ6PEM6 445 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vwa2Q70UZ7 791 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 ZfatQ7TS63 1237 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Smad3Q8BUN5 425 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Slc41a2Q8BYR8 573 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Snx16Q8C080 344 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 FkrpQ8CG64 494 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Prokr2Q8K458 381 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Fam161aQ8QZV6 448 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 NotumQ8R116 503 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn1r219Q8R271 312 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr986Q8VFN6 312 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr48Q8VGN4 301 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 HnrnpllQ921F4 591 aaKnown RBP12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rnf144aQ925F3 292 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Dcun1d5Q9CXV9 237 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Sec23bQ9D662 767 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 TesminQ9WTJ6 475 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Padi3Q9Z184 664 aa12.89□□□□□ -0.35
Nup88-201ENSMUST00000035283 Pappa2E9PZ87 1789 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Mup6A2AV72 179 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Il20rbE9Q9A6 308 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Prss56F2YMG0 604 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr171G5E8J1 314 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Phox2bO35690 314 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zfp28P10078 825 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 EnpepP16406 945 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Abcb1aP21447 1276 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 GalP47212 124 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Hnf4aP49698 474 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Ruvbl1P60122 456 aaKnown RBP12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 MedagQ14BA6 303 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tex10Q3URQ0 928 aaKnown RBP12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Slc25a51Q5HZI9 298 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Myl12aQ6ZWQ9 172 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr1051Q7TR76 308 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Fam205cQ80YD3 371 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vangl1Q80Z96 526 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Q8BL95 290 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Hus1Q8BQY8 280 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vps37aQ8CHS8 397 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Scara5Q8K299 491 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Mcfd2Q8K5B2 145 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn1r185Q8R299 319 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr1469Q8VFW5 309 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 ApofQ91V80 315 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 B3galt6Q91Z92 325 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 4930553M12RikQ9CUH1 165 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr701Q9D3U9 316 aa12.88□□□□□ -0.35
Nup88-201ENSMUST00000035283 Eif4hQ9WUK2 248 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 68.1 ms