RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Clp1Q99LI9 425 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Khdc3Q9CWU5 440 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 RtcAQ9D7H3 366 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 GatmQ9D964 423 aaKnown RBP12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Yae1d1Q9DAY6 216 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Myg1Q9JK81 380 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr1508Q9R0K4 310 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Serpinb9eO08806 377 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cst3P21460 140 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gja1P23242 382 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 FshrP35378 692 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lhx3P50481 400 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 GiprQ0P543 460 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cdkl4Q3TZA2 342 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tmub2Q3V209 319 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Usp17laQ61068 526 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 PcnpQ6P8I4 178 aaKnown RBP12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Fgl1Q71KU9 314 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Med26Q7TN02 588 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tas2r140Q7TQA4 312 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 C2cd4bQ80XU5 340 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 H2-M10.2Q85ZW9 329 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lrrtm2Q8BGA3 515 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Zcchc3Q8BPK2 400 aaKnown RBP12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Sdr9c7Q8K3P0 313 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Nrif1Q923B3 828 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Psat1Q99K85 370 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pbdc1Q9D0B6 198 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Trhr2Q9ERT2 382 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 SpastQ9QYY8 614 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Hey1Q9WV93 299 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Btbd35f21A0A140T8Q5 498 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gpr137cE9Q343 423 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pabpc4lG5E8X2 370 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Aldh3b3J3QMK6 479 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Btbd35f22J3QN64 498 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Prf1P10820 554 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Lman2lP59481 347 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gbx1P82976 418 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 IhhP97812 411 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 CamkmtQ3U2J5 323 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Rnf44Q3UHJ8 407 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gdi2Q61598 445 aaKnown RBP12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Prkd1Q62101 918 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 ParpbpQ6IRT3 573 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Cdh24Q6PFX6 781 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Chpt1Q8C025 398 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Sit1Q8C503 180 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Wdr26Q8C6G8 641 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Adgrg1Q8K209 687 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Fndc5Q8K4Z2 209 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr1417Q8VGJ6 315 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Snx11Q91WL6 271 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Uck2Q99PM9 261 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mgme1Q9CXC3 338 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ovca2Q9D7E3 225 aa12.28□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm30302A0A1Y7VN40 1110 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Prpmp5E9PXN1 296 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Polr1cP52432 346 aaKnown RBP12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gng2P63213 71 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Zfp41Q02526 198 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Slc37a3Q3TIT8 494 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tex10Q3URQ0 928 aaKnown RBP12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm2aQ60648 193 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Slc30a1Q60738 503 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Foxj1Q61660 421 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Pea15Q62048 130 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Dcaf13Q6PAC3 445 aaKnown RBP12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ranbp10Q6VN19 620 aaKnown RBP12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Olfr735Q7TRM4 354 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Commd2Q8BXC6 199 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Mta1Q8K4B0 715 aaKnown RBP12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Zcchc14Q8VIG0 956 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Ppp2r2dQ925E7 453 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Tysnd1Q9DBA6 568 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 PrepQ9QUR6 710 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 IL36RNQ9QYY1 156 aa12.27□□□□□ -0.44
Clcn3-201ENSMUST00000004430 Gm266A6H634 200 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Gm12800B1AUV4 484 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ech1O35459 327 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Bnip2O54940 326 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 TshrP47750 764 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Slc2a6Q3UDF0 497 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Klhl31Q8BWA5 634 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Nrip1Q8CBD1 1161 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ccdc58Q8R3Q6 144 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Zfp65Q91W94 390 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Dpp6Q9Z218 804 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Glipr1l3A0A1W2P7V2 236 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Baz2bA2AUY4 2123 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Olfr1303A2AVW1 312 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Vmn1r77E9PY60 306 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Smad6O35182 495 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Slc6a6O35316 621 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Zw10O54692 779 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Ccr4P51680 360 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Gnb5P62881 395 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 Rack1P68040 317 aaKnown RBP12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 IpmkQ7TT16 396 aa12.27□□□□□ -0.45
Clcn3-201ENSMUST00000004430 A730061H03RikQ8BGD2 154 aa12.27□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms