RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Col6a2Q02788 1034 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Kcna7Q17ST2 489 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Rassf5Q5EBH1 413 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Stard3Q61542 446 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Hs3st2Q673U1 367 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Ablim3Q69ZX8 682 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Serpina3aQ6P4P1 422 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr26Q7TRB7 308 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 MaobQ8BW75 520 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Tnfaip8l1Q8K288 186 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Ranbp3Q9CT10 491 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Ube2fQ9CY34 185 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Tmem269Q9D4Y8 254 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Ankrd7Q9D504 279 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr933Q9EQA0 308 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc35a2Q9R0M8 390 aa15.77■□□□□ 0.11
Shh-201ENSMUST00000002708 Aadacl2B2RWD2 401 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 E9Q0B3 247 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Gm8897L7N294 181 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 PtgdsO09114 189 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 HpnO35453 436 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Tp63O88898 680 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Cdh2P15116 906 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 FesP16879 822 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Pyroxd2Q3U4I7 581 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Cldn34b4Q3V0X2 211 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr1051Q7TR76 308 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Slco4c1Q8BGD4 722 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Fate1Q8CEK7 99 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Chchd4Q8VEA4 139 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Q91V76 315 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Tspan1Q99J59 240 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Col25a1Q99MQ5 666 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Desi1Q9CQT7 168 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 AnkhQ9JHZ2 492 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Loxl3Q9Z175 754 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Fbxw9F8VPX2 458 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Serpinb9cI7HJI5 387 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Sap18O55128 153 aaKnown RBP15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 PrnpP04925 254 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 CkmP07310 381 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Bmpr1aP36895 532 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Fkbp14P59024 211 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Copz1P61924 177 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Fam105aQ3TVP5 353 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Q3TYS2 187 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Sqstm1Q64337 442 aaKnown RBP15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Znf32Q80V23 272 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Snx16Q8C080 344 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr701Q9D3U9 316 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 RtcAQ9D7H3 366 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 PrepQ9QUR6 710 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Tpk1Q9R0M5 243 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 FarsbQ9WUA2 589 aaKnown RBP15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Gm7275E9Q1B3 247 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Gm8922F6XVS9 199 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Suv39h1O54864 412 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Cpt1aP97742 773 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Tgtp2Q3T9E4 415 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Cpxcr1Q3V0P1 322 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Med22Q62276 200 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Tgtp1Q62293 415 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Csgalnact1Q8BJQ9 530 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Adgrg7Q8BM96 785 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Glt28d2Q8BML3 165 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Gpr26Q8BZA7 337 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Q8C4P0 716 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Map2k7Q8CE90 535 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr48Q8VGN4 301 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc25a37Q920G8 338 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 MtapQ9CQ65 283 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Aldh7a1Q9DBF1 539 aa15.76■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr1123A2AT85 323 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 H60cB1B213 197 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Gm28048F7BCN0 99 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Foxd2O35392 492 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Hoxa4P06798 285 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Itgb7P26011 806 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Rgs14P97492 547 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Snta1Q61234 503 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Brinp2Q6DFY8 783 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Adipor2Q8BQS5 386 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Bag5Q8CI32 447 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 ZwilchQ8R060 589 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Mau2Q9D2X5 619 aaKnown RBP15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Kcne2Q9D808 123 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc22a17Q9D9E0 401 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Mettl15Q9DCL4 406 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Ap3m1Q9JKC8 418 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Nectin3Q9JLB9 549 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Vps29Q9QZ88 182 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Zcchc7B1AX39 541 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Gm8879F6R3J9 157 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 ChadO55226 358 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Stk16O88697 305 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Pou2f3P31362 431 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Emp1P47801 160 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 AcadvlP50544 656 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Wdr5P61965 334 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Polr2lP62876 67 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms