RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	HTATIP2	Q9BUP3	242 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	GLTP	Q9NZD2	209 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	COMMD3	Q9UBI1	195 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	FBXO9	Q9UK97	447 aa	Predicted RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	NDRG2	Q9UN36	371 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	FAM240B	A0A1B0GVZ2	78 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	STC2	O76061	302 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	ALPP	P05187	535 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	RPLP2	P05387	115 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	ALAS2	P22557	587 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	PSMA1	P25786	263 aa	Known RBP	13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	HNF1B	P35680	557 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	KCNA10	Q16322	511 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	TRPV1	Q8NER1	839 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	OR4M2	Q8NGB6	313 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	TBC1D20	Q96BZ9	403 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	LHX3	Q9UBR4	397 aa		13.8	□□□□□ -0.2
SYNRG-231	ENST00000622045	LOC102723532	A0A0G2JNH3	316 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	PCDH17	O14917	1159 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	AMD1	P17707	334 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	EVI2B	P34910	448 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	WSCD2	Q2TBF2	565 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	UAP1L1	Q3KQV9	507 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	C19orf18	Q8NEA5	215 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	PPIL3	Q9H2H8	161 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	ING3	Q9NXR8	418 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	TRPM5	Q9NZQ8	1165 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	PCP4L1	A6NKN8	68 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	EOMES	O95936	686 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	CD160	O95971	181 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	GPX2	P18283	190 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	RPL17	P18621	184 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	CNR2	P34972	360 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	SPAM1	P38567	509 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	BNC1	Q01954	994 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	TSTA3	Q13630	321 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	PTGES3	Q15185	160 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	POU4F3	Q15319	338 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	UGT8	Q16880	541 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.79	□□□□□ -0.2	3e-7	■■□□□ 12.8
SYNRG-231	ENST00000622045	SPDYE7P	Q495Y7	208 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	IQCC	Q4KMZ1	466 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	TRIQK	Q629K1	86 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	CXorf57	Q6NSI4	855 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	TMIGD1	Q6UXZ0	262 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	TSEN54	Q7Z6J9	526 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	NXPE1	Q8N323	547 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	PIH1D2	Q8WWB5	315 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	EPYC	Q99645	322 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	DUSP26	Q9BV47	211 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	POLR2J2	Q9GZM3	115 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	RDH14	Q9HBH5	336 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	NDUFAF4	Q9P032	175 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	YARS2	Q9Y2Z4	477 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	GNG14	A0A1W2PPG7	69 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	ENTPD6	O75354	484 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	SOX14	O95416	240 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	PDGFA	P04085	211 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	SEMG1	P04279	462 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	IGFBP1	P08833	259 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	SRC	P12931	536 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	NSG1	P42857	185 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	MAP2K3	P46734	347 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	PRIM2	P49643	509 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	CRYBA2	P53672	197 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	CCL23	P55773	120 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	ABR	Q12979	859 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	XKR6	Q5GH73	641 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	CPTP	Q5TA50	214 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	LYPLAL1	Q5VWZ2	237 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	MFSD14C	Q5VZR4	134 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	CDH24	Q86UP0	819 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	HS6ST3	Q8IZP7	471 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	DNAJC11	Q9NVH1	559 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	ANKRD36	A6QL64	1941 aa		13.79	□□□□□ -0.2
SYNRG-231	ENST00000622045	MGAT4D	A6NG13	374 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	WASHC1	A8K0Z3	465 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	APOL3	O95236	402 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	GABRB1	P18505	474 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	EPOR	P19235	508 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	M6PR	P20645	277 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	CDC42	P60953	191 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	LEXM	Q3ZCV2	418 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	LCN1P1	Q5VSP4	162 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	PLAG1	Q6DJT9	500 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF767P	Q75MW2	155 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	TSPAN33	Q86UF1	283 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	TCTE3	Q8IZS6	198 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	SYT14	Q8NB59	555 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	GPR156	Q8NFN8	814 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	UBTD2	Q8WUN7	234 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	SGIP1	Q9BQI5	828 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	B3GNT4	Q9C0J1	378 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	CLN6	Q9NWW5	311 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	VPS29	Q9UBQ0	182 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	ADAMDEC1	O15204	470 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	PSIP1	O75475	530 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	CELF2	O95319	508 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	ATF6	P18850	670 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	CSK	P41240	450 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms