RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	HSPE1-MOB4	S4R3N1	261 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	LRRK1	Q38SD2	2015 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	TMEM247	A6NEH6	219 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	CACNB4	O00305	520 aa	Predicted RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF682	O95780	498 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	GPX2	P18283	190 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	PRKACG	P22612	351 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	IMPA1	P29218	277 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	PIGA	P37287	484 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	PPP1R8	Q12972	351 aa	Known RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	FGL2	Q14314	439 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	CPZ	Q66K79	652 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF621	Q6ZSS3	439 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLCO6A1	Q86UG4	719 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	ARL10	Q8N8L6	244 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR2L2	Q8NH16	312 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	ASB12	Q8WXK4	309 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	C11orf24	Q96F05	449 aa	Predicted RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	LGR4	Q9BXB1	951 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	DGCR6L	Q9BY27	220 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	FAM32A	Q9Y421	112 aa	Known RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	PRUNE2	Q8WUY3	3088 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	HTR3E	A5X5Y0	456 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	MAGEB17	A8MXT2	336 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	KMO	O15229	486 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	AQP9	O43315	295 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	KCNK5	O95279	499 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	CPSF4	O95639	269 aa	Known RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	SHQ1	Q6PI26	577 aa	Known RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	DCP2	Q8IU60	420 aa	Known RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	TSTD1	Q8NFU3	115 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR10Q1	Q8NGQ4	319 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	CDC26	Q8NHZ8	85 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	PHF10	Q8WUB8	498 aa	Known RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	EFHD2	Q96C19	240 aa	Predicted RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	ITM2C	Q9NQX7	267 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	MOSPD1	Q9UJG1	213 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	RPS6KA6	Q9UK32	745 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	TPRKB	Q9Y3C4	175 aa		13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	GPC6	Q9Y625	555 aa	Predicted RBP	13.3	□□□□□ -0.28
COPS7B-223	ENST00000611614	CHURC1-FNTB	B4DL54	471 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614		M0R3G1	203 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	STK25	O00506	426 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	SCAMP2	O15127	329 aa	Known RBP	13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	LILRB5	O75023	590 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	JRK	O75564	520 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLC16A8	O95907	504 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	C1QC	P02747	245 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	LAMP1	P11279	417 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	ACSL1	P33121	698 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	ASMT	P46597	345 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	CXCR4	P61073	352 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	RAE1	P78406	368 aa	Known RBP	13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	LAIR2	Q6ISS4	152 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	PRSS48	Q7RTY5	328 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	GPR155	Q7Z3F1	870 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZBTB46	Q86UZ6	589 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF547	Q8IVP9	402 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	RORB	Q92753	470 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	MYOC	Q99972	504 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	DUSP26	Q9BV47	211 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	GABARAPL1	Q9H0R8	117 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	DPEP2	Q9H4A9	486 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	LTB4R2	Q9NPC1	389 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	VNN3	Q9NY84	501 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	MAPRE3	Q9UPY8	281 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	PRKAB1	Q9Y478	270 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	DGKB	Q9Y6T7	804 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	FAM170B	A6NMN3	283 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	JUND	P17535	347 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	PDHA2	P29803	388 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	RXRG	P48443	463 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	PPP2CB	P62714	309 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	PPP2CA	P67775	309 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	SF1	Q15637	639 aa	Known RBP	13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	TRIM69	Q86WT6	500 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	PTOV1	Q86YD1	416 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	CLECL1	Q8IZS7	167 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	C1orf52	Q8N6N3	182 aa	Known RBP	13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	DENND6B	Q8NEG7	585 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	CHTF18	Q8WVB6	975 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	FAR1	Q8WVX9	515 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	SGCD	Q92629	289 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	RMI1	Q9H9A7	625 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	TM9SF3	Q9HD45	589 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	FZD3	Q9NPG1	666 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	IL1RAP	Q9NPH3	570 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	BTNL2	Q9UIR0	455 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	ERVK-11	Q9UQG0	969 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	PCDHB11	Q9Y5F2	797 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614		U3KQV3	271 aa		13.29	□□□□□ -0.28
COPS7B-223	ENST00000611614	BCKDK	O14874	412 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	YY2	O15391	372 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	KDM1A	O60341	852 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	INMT	O95050	263 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ETHE1	O95571	254 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SEMA4F	O95754	770 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms