RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 HUS1BQ8NHY5 278 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 IRF7Q92985 503 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 VMP1Q96GC9 406 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 COQ7Q99807 217 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 TTYH2Q9BSA4 534 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 SERHL2Q9H4I8 314 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 GORASP2Q9H8Y8 452 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 SERHLQ9NQF3 203 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 ZCCHC3Q9NUD5 404 aaKnown RBP9.96□□□□□ -0.81
CTCFL-216ENST00000608263 FAM120CQ9NX05 1096 aaKnown RBP9.96□□□□□ -0.81
CTCFL-216ENST00000608263 NRXN2Q9P2S2 1712 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.81
CTCFL-216ENST00000608263 PRR23D1E9PI22 279 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 PRR23D2P0DMB1 279 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ACP5P13686 325 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 TCEA1P23193 301 aaKnown RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 PPP5CP53041 499 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 XKR7Q5GH72 579 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 CATSPEREQ5SY80 951 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 DESI1Q6ICB0 168 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 C16orf62Q7Z3J2 963 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 GPR149Q86SP6 731 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 HOMEZQ8IX15 550 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 C10orf53Q8N6V4 93 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 TSTD1Q8NFU3 115 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 TEX47Q8TBZ9 253 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 CIDECQ96AQ7 238 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF607Q96SK3 696 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 CCM2Q9BSQ5 444 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 SORBS1Q9BX66 1292 aaKnown RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 SPRTNQ9H040 489 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 CA14Q9ULX7 337 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ENTPD4Q9Y227 616 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 SPACA6W5XKT8 324 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 CPSF4LA6NMK7 179 aaKnown RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 HAT1O14929 419 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 SEC14L2O76054 403 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 RETP07949 1114 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 PSKH1P11801 424 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ACPPP15309 386 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ACTR1BP42025 376 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 HNMTP50135 292 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ERVFC1P60507 584 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 DSTNP60981 165 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ACTR1AP61163 376 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 AMZ1Q400G9 498 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ATAD3BQ5T9A4 648 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 UBE2UQ5VVX9 321 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 SHFQ7M4L6 423 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 TSPYL5Q86VY4 417 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-216ENST00000608263 CYP4Z2PQ8N1L4 340 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 FCGR1BQ92637 280 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 DOHHQ9BU89 302 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ACOT13Q9NPJ3 140 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 IL37Q9NZH6 218 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF222Q9UK12 451 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 POFUT2Q9Y2G5 429 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 TMEM98Q9Y2Y6 226 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 PCDHB11Q9Y5F2 797 aa9.96□□□□□ -0.82
CTCFL-216ENST00000608263 FAM227AF5H4B4 570 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 FHP07954 510 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 HPGDP15428 266 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ITIH1P19827 911 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 S100A1P23297 94 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CNR2P34972 360 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 DHPSP49366 369 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 AP1S2P56377 157 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SCN1BQ07699 218 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 COX10Q12887 443 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 LPAL2Q16609 132 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 RPS26P11Q5JNZ5 115 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF730Q6ZMV8 503 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ASB18Q6ZVZ8 466 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 METTL3Q86U44 580 aaKnown RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 VRK3Q8IV63 474 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 LILRA3Q8N6C8 439 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 IQCF1Q8N6M8 205 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 FAM83FQ8NEG4 500 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SLC9A6Q92581 669 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SLC30A2Q9BRI3 323 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 MMP27Q9H306 513 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 TRIT1Q9H3H1 467 aaKnown RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CLMPQ9H6B4 373 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ELAC1Q9H777 363 aaKnown RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SP140LQ9H930 580 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 NEK6Q9HC98 313 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 IL1RAPQ9NPH3 570 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 ZC4H2Q9NQZ6 224 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 TAC3Q9UHF0 121 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 GTF2A1LQ9UNN4 478 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CFL2Q9Y281 166 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 MRPS17Q9Y2R5 130 aaKnown RBP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 HTR3EA5X5Y0 456 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CD40LGP29965 261 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 NTSP30990 170 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 SSTR4P31391 388 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 CSTF2P33240 577 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTCFL-216ENST00000608263 HOXD12P35452 270 aa9.95□□□□□ -0.82
CTCFL-216ENST00000608263 GP2P55259 537 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms