RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TM4SF18Q96CE8 201 aa21.6■■□□□ 1.05
CCDC47-204ENST00000582252 DPH2Q9BQC3 489 aaPredicted RBP21.6■■□□□ 1.05
CCDC47-204ENST00000582252 SORBS1Q9BX66 1292 aaKnown RBP21.6■■□□□ 1.05
CCDC47-204ENST00000582252 NLNQ9BYT8 704 aa21.6■■□□□ 1.05
CCDC47-204ENST00000582252 SLC6A16Q9GZN6 736 aa21.6■■□□□ 1.05
CCDC47-204ENST00000582252 TM9SF3Q9HD45 589 aa21.6■■□□□ 1.05
CCDC47-204ENST00000582252 OR6C2Q9NZP2 312 aa21.6■■□□□ 1.05
CCDC47-204ENST00000582252 ORC6Q9Y5N6 252 aa21.6■■□□□ 1.05
CCDC47-204ENST00000582252 CACNA1IQ9P0X4 2223 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 PLOD2O00469 737 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 SNAP29O95721 258 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 SEMA4FO95754 770 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 UQCRC2P22695 453 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 AHRP35869 848 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 ARFIP1P53367 373 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 TUBA4AP68366 448 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 SPIDRQ14159 915 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 RFX4Q33E94 735 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 TTC23Q5W5X9 447 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 ZFP28Q8NHY6 868 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 OR5P2Q8WZ92 322 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 PDXPQ96GD0 296 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 YTHDF1Q9BYJ9 559 aaKnown RBP21.59■■□□□ 1.05
CCDC47-204ENST00000582252 TMEM38AQ9H6F2 299 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 TAAR2Q9P1P5 351 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 PCOLCE2Q9UKZ9 415 aa21.59■■□□□ 1.05
CCDC47-204ENST00000582252 PDPK1O15530 556 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 PRICKLE3O43900 615 aaPredicted RBP21.58■■□□□ 1.05
CCDC47-204ENST00000582252 FKBP9O95302 570 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 ATP6V1B1P15313 513 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 SOAT1P35610 550 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 MPEG1Q2M385 716 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 FOXB2Q5VYV0 432 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 OR4C11Q6IEV9 310 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 SPESP1Q6UW49 350 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 NAGSQ8N159 534 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 CAMKK1Q8N5S9 505 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 ZNF555Q8NEP9 628 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 OR2L3Q8NG85 312 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 BMFQ96LC9 184 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 NECAB3Q96P71 396 aaPredicted RBP21.58■■□□□ 1.05
CCDC47-204ENST00000582252 DDX31Q9H8H2 851 aaKnown RBP21.58■■□□□ 1.05
CCDC47-204ENST00000582252 NEUROD4Q9HD90 331 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 TUBA8Q9NY65 449 aaPredicted RBP21.58■■□□□ 1.05
CCDC47-204ENST00000582252 C3orf18Q9UK00 162 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 UTS2RQ9UKP6 389 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 CYP8B1Q9UNU6 501 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 HS3ST3A1Q9Y663 406 aa21.58■■□□□ 1.05
CCDC47-204ENST00000582252 NUP214P35658 2090 aaPredicted RBP21.58■■□□□ 1.05
CCDC47-204ENST00000582252 IGKV1-8A0A0C4DH67 115 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 RTCAO00442 366 aaKnown RBP21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SUV39H1O43463 412 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 NOBOXO60393 691 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SEMG1P04279 462 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SERPIND1P05546 499 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SSR2P43308 183 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 PRIM2P49643 509 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 OR2T5Q6IEZ7 315 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SHQ1Q6PI26 577 aaKnown RBP21.58■■□□□ 1.04
CCDC47-204ENST00000582252 USP51Q70EK9 711 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 AMIGO1Q86WK6 493 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 OR2T29Q8NH02 315 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 CREB3L4Q8TEY5 395 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SLC22A18Q96BI1 424 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 HSH2DQ96JZ2 352 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SARGQ9BW04 601 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 YIPF3Q9GZM5 350 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 TBC1D29Q9UFV1 150 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 RAPGEFL1Q9UHV5 662 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 SNX7Q9UNH6 387 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 PCDHGA2Q9Y5H1 932 aa21.58■■□□□ 1.04
CCDC47-204ENST00000582252 ZDBF2Q9HCK1 2354 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 HEATR5BQ9P2D3 2071 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 TTC28Q96AY4 2481 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 LCMT2O60294 686 aaKnown RBP21.57■■□□□ 1.04
CCDC47-204ENST00000582252 C1QCP02747 245 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 TFAP2AP05549 437 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 DCNP07585 359 aaKnown RBP21.57■■□□□ 1.04
CCDC47-204ENST00000582252 GNAO1P09471 354 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 DCTP40126 519 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 RAD23AP54725 363 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 PPP2R2BQ00005 443 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 ZNF630Q2M218 657 aaPredicted RBP21.57■■□□□ 1.04
CCDC47-204ENST00000582252 TJAP1Q5JTD0 557 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 TMEM31Q5JXX7 168 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 ISLR2Q6UXK2 745 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 TMEM26Q6ZUK4 368 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 PIWIL3Q7Z3Z3 882 aaKnown RBP21.57■■□□□ 1.04
CCDC47-204ENST00000582252 ZNF786Q8N393 782 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 SRFBP1Q8NEF9 429 aaKnown RBP21.57■■□□□ 1.04
CCDC47-204ENST00000582252 LCN9Q8WX39 176 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 EDAQ92838 391 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 FBXL20Q96IG2 436 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 FAIM2Q9BWQ8 316 aa21.57■■□□□ 1.04
CCDC47-204ENST00000582252 SCHIP1Q9P0W5 487 aaPredicted RBP21.57■■□□□ 1.04
CCDC47-204ENST00000582252 GUCY1B2O75343 617 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 TNFRSF21O75509 655 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 IFNA14P01570 189 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 DRD2P14416 443 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 CD6P30203 668 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms