RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 FERD3LQ96RJ6 166 aa8.19□□□□□ -1.1
RPAIN-215ENST00000575112 TMEM246Q9BRR3 403 aa8.19□□□□□ -1.1
RPAIN-215ENST00000575112 HTATIP2Q9BUP3 242 aa8.19□□□□□ -1.1
RPAIN-215ENST00000575112 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
RPAIN-215ENST00000575112 ARHGEF33A8MVX0 844 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SMLR1H3BR10 107 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 ATG13O75143 517 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CH25HO95992 272 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 FABP3P05413 133 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 ITGB8P26012 769 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 MAPK1P28482 360 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 HOXC8P31273 242 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 RYKP34925 604 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SOX9P48436 509 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CLCNKAP51800 687 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CRYBA2P53672 197 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 MLLT1Q03111 559 aaPredicted RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 BAK1Q16611 211 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 TYW3Q6IPR3 259 aaKnown RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 FRMD1Q8N878 549 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 NEIL2Q969S2 332 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 PYURFQ96I23 114 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 HEBP1Q9NRV9 189 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 COQ3Q9NZJ6 369 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 EHD3Q9NZN3 535 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 DEC1Q9P2X7 70 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 RNF6Q9Y252 685 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 A0A0X1KG70 313 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 PRKRAO75569 313 aaKnown RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 HPRP00739 348 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 F11P03951 625 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CYP2A6P11509 494 aaPredicted RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CKMT1AP12532 417 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 ZNF8P17098 575 aaPredicted RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 LAG3P18627 525 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SERPINB10P48595 397 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 GZMMP51124 257 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 HOXC5Q00444 222 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SMARCB1Q12824 385 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 TIGD6Q17RP2 521 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 LRRC26Q2I0M4 334 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 INO80DQ53TQ3 878 aaPredicted RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CLEC12AQ5QGZ9 265 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CCDC149Q6ZUS6 474 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 BCDIN3DQ7Z5W3 292 aaKnown RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 GPR149Q86SP6 731 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 TRIM48Q8IWZ4 208 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 OR9Q2Q8NGE9 314 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 WDR48Q8TAF3 677 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 FBLIM1Q8WUP2 373 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CITED4Q96RK1 184 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 COPS4Q9BT78 406 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 KCNK12Q9HB15 430 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 RANGRFQ9HD47 186 aaPredicted RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 USE1Q9NZ43 259 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 OARD1Q9Y530 152 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 PCDHGB6Q9Y5F9 930 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 PCDHGA6Q9Y5G7 932 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CASP8AP2Q9UKL3 1982 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 ISM1B1AKI9 464 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 FRS3O43559 492 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CHRNB1P11230 501 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 PTPN6P29350 595 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 GALK2Q01415 458 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 RFX4Q33E94 735 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 ZNF542PQ5EBM4 170 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 KDM4DQ6B0I6 523 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 PAMR1Q6UXH9 720 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SLC39A11Q8N1S5 342 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SVOPQ8N4V2 548 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 CELF5Q8N6W0 485 aaKnown RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 EFHD2Q96C19 240 aaPredicted RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 TRMT61AQ96FX7 289 aaKnown RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SLC35A5Q9BS91 424 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 SLC6A17Q9H1V8 727 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 TIGARQ9NQ88 270 aa8.18□□□□□ -1.1
RPAIN-215ENST00000575112 THUMPD1Q9NXG2 353 aaKnown RBP8.18□□□□□ -1.1
RPAIN-215ENST00000575112 TBC1D3DA0A087WVF3 549 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 TBC1D3IA0A087WXS9 549 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 TBC1D3EA0A087X179 549 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 TBC1D3KA0A087X1G2 549 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 PRAMEF33A0A0G2JMD5 474 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 A0A0G2JMP0 313 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 TBC1D3FA6NER0 549 aaPredicted RBP8.17□□□□□ -1.1
RPAIN-215ENST00000575112 TBC1D3LB9A6J9 549 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 GNB5O14775 395 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 PPM1DO15297 605 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 ETHE1O95571 254 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 C9P02748 559 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 CLTBP09497 229 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 C1SP09871 688 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 TBC1D3HP0C7X1 549 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 EBLN1P0CF75 366 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 IFI30P13284 250 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 TIE1P35590 1138 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 HTR3AP46098 478 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 OR2B6P58173 313 aa8.17□□□□□ -1.1
RPAIN-215ENST00000575112 SNRPD2P62316 118 aaKnown RBP8.17□□□□□ -1.1
RPAIN-215ENST00000575112 GPLD1P80108 840 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms