RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ATG14Q6ZNE5 492 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 COX15Q7KZN9 410 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 UBE3DQ7Z6J8 389 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 PROSER1Q86XN7 944 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 CRLF3Q8IUI8 442 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 PRSS58Q8IYP2 241 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 CA13Q8N1Q1 262 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 AMER3Q8N944 861 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 STT3BQ8TCJ2 826 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 MAGEB18Q96M61 343 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 CCNL2Q96S94 520 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 PNPOQ9NVS9 261 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 CTSFQ9UBX1 484 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 DNAJC15Q9Y5T4 150 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 IGF2RP11717 2491 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 PIP5K1BO14986 540 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 CAPNS1P04632 268 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 KLK1P06870 262 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 KITP10721 976 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 IL10P22301 178 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 PTPN4P29074 926 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 BSGP35613 385 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 SLAMF1Q13291 335 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 RUNX2Q13950 521 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 NR6A1Q15406 480 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 MINDY4Q4G0A6 757 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 SPIN4Q56A73 249 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 VWA2Q5GFL6 755 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 CCNYL2Q5T2Q4 361 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF793Q6ZN11 406 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 SPACA3Q8IXA5 215 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 METTL4Q8N3J2 472 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 C1orf52Q8N6N3 182 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 ZSCAN1Q8NBB4 408 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 CCT7Q99832 543 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 FAM117AQ9C073 453 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 SLC26A1Q9H2B4 701 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 SOX17Q9H6I2 414 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 WDR54Q9H977 334 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 C14orf105Q9NVL8 296 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 RIC8BQ9NVN3 520 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 IL17BQ9UHF5 180 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 ADAM29Q9UKF5 820 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 FBXW2Q9UKT8 454 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 MRPS33Q9Y291 106 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 PTGDR2Q9Y5Y4 395 aa13.72□□□□□ -0.21
NPLOC4-218ENST00000574964 B4GALT2O60909 372 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 DNAJB6O75190 326 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 SEC22BO75396 215 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 ZGLP1P0C6A0 271 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 CPN2P22792 545 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 JAK1P23458 1154 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 F8A1P23610 371 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 RAB38P57729 211 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 RPS18P62269 152 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 MC1RQ01726 317 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 OCRLQ01968 901 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 ERV3-1Q14264 604 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 UGT3A2Q3SY77 523 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 CCDC81Q6ZN84 652 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 RNF165Q6ZSG1 346 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 SHISA6Q6ZSJ9 500 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 COMMD6Q7Z4G1 85 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 ZCCHC7Q8N3Z6 543 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 KDF1Q8NAX2 398 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 ADAMTS18Q8TE60 1221 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 TBC1D20Q96BZ9 403 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 APIPQ96GX9 242 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 RBCK1Q9BYM8 510 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 TUBB1Q9H4B7 451 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 ACTL8Q9H568 366 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 DDX31Q9H8H2 851 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 LRTM1Q9HBL6 345 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 LYRM4Q9HD34 91 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 LYARQ9NX58 379 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 MARCOQ9UEW3 520 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 PHF11Q9UIL8 331 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 HAO1Q9UJM8 370 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 TCFL5Q9UL49 500 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 DAPP1Q9UN19 280 aa13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 MRPS18BQ9Y676 258 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-218ENST00000574964 CHD8Q9HCK8 2581 aa13.71□□□□□ -0.22
NPLOC4-218ENST00000574964 IGLV3-12A0A075B6K2 115 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 GNG14A0A1W2PPG7 69 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 SLCO1B7G3V0H7 640 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 PCDH7O60245 1069 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 EEDO75530 441 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 CREG1O75629 220 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 SCELO95171 688 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 BMP10O95393 424 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 GBAP04062 536 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 HEXBP07686 556 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms