RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SPIN4Q56A73 249 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ANXA8L1Q5VT79 327 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 TMEM236Q5W0B7 351 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 KDM4DQ6B0I6 523 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ERICH5Q6P6B1 374 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 CORO6Q6QEF8 472 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 BTLAQ7Z6A9 289 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 NLGN4XQ8N0W4 816 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 OR9Q2Q8NGE9 314 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 NDNFQ8TB73 568 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PROX1Q92786 737 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 APOL4Q9BPW4 351 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 MACROD1Q9BQ69 325 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 TUBA1CQ9BQE3 449 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 LGR4Q9BXB1 951 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ROGDIQ9GZN7 287 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 TRIT1Q9H3H1 467 aaKnown RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 REEP4Q9H6H4 257 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 FKBP14Q9NWM8 211 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SLC23A2Q9UGH3 650 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 EYSQ5T1H1 3165 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 A0A1W2PRB8 838 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 WASHC1A8K0Z3 465 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF701M0R085 212 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 M0R3G1 203 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SLC16A6O15403 523 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SPINT1O43278 529 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PCDHGA12O60330 932 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 RASGRP1O95267 797 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PRNPP04156 253 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 DDX6P26196 483 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 C21orf33P30042 268 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 KRT20P35900 424 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SLC19A1P41440 591 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 NCS1P62166 190 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 KCNJ10P78508 379 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 MLLT1Q03111 559 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SCARB2Q14108 478 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF234Q14588 700 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 RPS26P11Q5JNZ5 115 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 GTF2IRD2BQ6EKJ0 949 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 WASH2PQ6VEQ5 465 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SLCO6A1Q86UG4 719 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 GTF2IRD2Q86UP8 949 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 LSRQ86X29 649 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 CCDC71Q8IV32 467 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SYNPOQ8N3V7 929 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SLC5A8Q8N695 610 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SETD9Q8NE22 299 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 OR52E4Q8NGH9 312 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 FNDC8Q8TC99 324 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 C16orf78Q8WTQ4 265 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 FAR1Q8WVX9 515 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 OR8D1Q8WZ84 308 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 RAB8BQ92930 207 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PLEKHA8Q96JA3 519 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 F2RL3Q96RI0 385 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 DOK1Q99704 481 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 CRISPLD2Q9H0B8 497 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 DMRT3Q9NQL9 472 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 TPRKBQ9Y3C4 175 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 OR1A2Q9Y585 309 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 MYO9BQ13459 2157 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 C1orf226A1L170 272 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ANKDD1BA6NHY2 528 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 FAM227AF5H4B4 570 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 H7BY64 318 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 GCM2O75603 506 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ADH1CP00326 375 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PNLIPRP1P54315 467 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 C21orf58P58505 322 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 MVKQ03426 396 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 HSPB3Q12988 150 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 TOP3AQ13472 1001 aaPredicted RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SMAD4Q13485 552 aaKnown RBP8.38□□□□□ -1.07
LINC00558-201ENST00000569422 CAMK1Q14012 370 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 MPEG1Q2M385 716 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 C9orf64Q5T6V5 341 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 C1orf122Q6ZSJ8 110 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 OLIG3Q7RTU3 272 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ZER1Q7Z7L7 766 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 TERB1Q8NA31 727 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 CXorf40AQ8TE69 158 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PRAP1Q96NZ9 151 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 RAD9AQ99638 391 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 DOHHQ9BU89 302 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SLC6A16Q9GZN6 736 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 BRF2Q9HAW0 419 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PCDHGA10Q9Y5H3 936 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SYNDIG1LA6NDD5 238 aa8.37□□□□□ -1.07
LINC00558-201ENST00000569422 SLC9A3R1O14745 358 aaPredicted RBP8.37□□□□□ -1.07
LINC00558-201ENST00000569422 C9P02748 559 aa8.37□□□□□ -1.07
LINC00558-201ENST00000569422 HSMCR30P0CW71 290 aa8.37□□□□□ -1.07
LINC00558-201ENST00000569422 PCMT1P22061 227 aa8.37□□□□□ -1.07
LINC00558-201ENST00000569422 RYKP34925 604 aa8.37□□□□□ -1.07
LINC00558-201ENST00000569422 OPRL1P41146 370 aa8.37□□□□□ -1.07
LINC00558-201ENST00000569422 GRSF1Q12849 480 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC00558-201ENST00000569422 WSCD2Q2TBF2 565 aa8.37□□□□□ -1.07
LINC00558-201ENST00000569422 PAGE2BQ5JRK9 111 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms