RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 UNQ6494/PRO21346Q6UXR6 183 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 PAGE2Q7Z2X7 111 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 NUDT13Q86X67 352 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 WDR75Q8IWA0 830 aaKnown RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 CA13Q8N1Q1 262 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 IL22RA1Q8N6P7 574 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 CT55Q8WUE5 264 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 FCRL1Q96LA6 429 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 C3orf30Q96M34 536 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 OR1F2PQ96R84 312 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 EFHD1Q9BUP0 239 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 MEAF6Q9HAF1 191 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 MS4A12Q9NXJ0 267 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 ZNF282Q9UDV7 671 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 KCND3Q9UK17 655 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 NXT1Q9UKK6 140 aaKnown RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 FARSAQ9Y285 508 aaKnown RBP11.99□□□□□ -0.49
SYNE2-219ENST00000555323 PTGDR2Q9Y5Y4 395 aa11.99□□□□□ -0.49
SYNE2-219ENST00000555323 A0A0G2JN53 185 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 TMEM8BA6NDV4 472 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 TCP11X1B4DZS4 312 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 C9J4A7 227 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 CYR61O00622 381 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 EDF1O60869 148 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 CNOT3O75175 753 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 RDH16O75452 317 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 EEDO75530 441 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 TGDSO95455 350 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 JUNP05412 331 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 KLK1P06870 262 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 PRR35P0CG20 571 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 F8A1P23610 371 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 CERS1P27544 350 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 EIF2S3P41091 472 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SSR2P43308 183 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 GSTM5P46439 218 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 LIM2P55344 173 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 TRA2BP62995 288 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 RAE1P78406 368 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 MAT1AQ00266 395 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SLAMF1Q13291 335 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 DNASE1L3Q13609 305 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SLC9A5Q14940 896 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SYT16Q17RD7 645 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SMU1Q2TAY7 513 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 RFTN2Q52LD8 501 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 MLIPQ5VWP3 458 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 COMMD6Q7Z4G1 85 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 DDIASQ8IXT1 998 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SHISA5Q8N114 240 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 METTL27Q8N6F8 245 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 C1orf52Q8N6N3 182 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 KDF1Q8NAX2 398 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 OR5T3Q8NGG3 340 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 STT3BQ8TCJ2 826 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 ADAMTS18Q8TE60 1221 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 TBC1D20Q96BZ9 403 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 C19orf60Q96EN9 201 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 MAELQ96JY0 434 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 PPP3R2Q96LZ3 170 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SPSB2Q99619 263 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 SORBS1Q9BX66 1292 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 COPS7BQ9H9Q2 264 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 LRTM1Q9HBL6 345 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 PRM3Q9NNZ6 103 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 C1orf109Q9NX04 203 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 TRPC4Q9UBN4 977 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 MCM8Q9UJA3 840 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 CROTQ9UKG9 612 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 WBP11Q9Y2W2 641 aaKnown RBP11.98□□□□□ -0.49
SYNE2-219ENST00000555323 TMED5Q9Y3A6 229 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 ASB4Q9Y574 426 aa11.98□□□□□ -0.49
SYNE2-219ENST00000555323 ZNF860A6NHJ4 632 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 TRPC5OSA6NMA1 111 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 TAF4O00268 1085 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 PROM1O43490 865 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 TMPRSS11DO60235 418 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 VPS4BO75351 444 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 SEC22BO75396 215 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 CYC1P08574 325 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 ZGLP1P0C6A0 271 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 RNH1P13489 461 aaKnown RBP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 ACPPP15309 386 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 ALOX15P16050 662 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 PTPN4P29074 926 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 DLSTP36957 453 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 RAB38P57729 211 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 RPS15P62841 145 aaKnown RBP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 OLR1P78380 273 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 OCA2Q04671 838 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 ACSM2AQ08AH3 577 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 VWA2Q5GFL6 755 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 SPDYAQ5MJ70 313 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 C6orf136Q5SQH8 315 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 CCNYL2Q5T2Q4 361 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 ACSM2BQ68CK6 577 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 LARP4Q71RC2 724 aaKnown RBP eCLIP11.97□□□□□ -0.49
SYNE2-219ENST00000555323 GPR180Q86V85 440 aa11.97□□□□□ -0.49
SYNE2-219ENST00000555323 PROSER1Q86XN7 944 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms