RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ABRAXAS2Q15018 415 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 MAPKAPK3Q16644 382 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 NDUFA9Q16795 377 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 ANKRD20A4Q4UJ75 823 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 MFSD4BQ5TF39 518 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 CES4AQ5XG92 561 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PTRHD1Q6GMV3 140 aaKnown RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 RNF111Q6ZNA4 994 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 LRRC6Q86X45 466 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 VSTM4Q8IW00 320 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 MPP5Q8N3R9 675 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 HORMAD2Q8N7B1 307 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 ZFP62Q8NB50 900 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 POGLUT1Q8NBL1 392 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PPFIBP2Q8ND30 876 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PLPP5Q8NEB5 264 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 OR51Q1Q8NH59 317 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 C16orf52Q8NHV5 167 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 MAGEC3Q8TD91 643 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 ZNF480Q8WV37 535 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 LPGAT1Q92604 370 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 MRFAP1L1Q96HT8 127 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 CCDC138Q96M89 665 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 FOPNLQ96NB1 174 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PKP4Q99569 1192 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 LPAR4Q99677 370 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TM9SF2Q99805 663 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TP63Q9H3D4 680 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-219ENST00000553488 TREX1Q9NSU2 369 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 PRR13Q9NZ81 148 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 CUBNO60494 3623 aa6.8□□□□□ -1.32
ATXN3-219ENST00000553488 FAM237BA0A1B0GVD1 139 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 TCRBV7S2A1N4TA0A589 114 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 TMEM82A0PJX8 343 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 NOTOA8MTQ0 251 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 MAGEB17A8MXT2 336 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 GOLGA6L19H0YKK7 550 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 SGK494L7N484 410 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 NDC80O14777 642 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 KPNA5O15131 536 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 CD3EAPO15446 510 aaKnown RBP6.79□□□□□ -1.32
ATXN3-219ENST00000553488 HS6ST1O60243 411 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 KIF5CO60282 957 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 NIPSNAP2O75323 286 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 RDH16O75452 317 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 CTAG2O75638 210 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 CDC123O75794 336 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-219ENST00000553488 ZWINTO95229 277 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 TPM3P06753 285 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 PPARGP37231 505 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-219ENST00000553488 MAGEA1P43355 309 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 CYB561P49447 251 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 HK2P52789 917 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 ITGA8P53708 1063 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 EIF3BP55884 814 aaKnown RBP6.79□□□□□ -1.32
ATXN3-219ENST00000553488 RWDD2BP57060 319 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 MLF1P58340 268 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 TAS2R50P59544 299 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 ADAM8P78325 824 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 ABATP80404 500 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 MYBPHQ13203 477 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 KCNJ11Q14654 390 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 CEBPEQ15744 281 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 TYSND1Q2T9J0 566 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 ACSBG2Q5FVE4 666 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 TMEM211Q6ICI0 200 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 RPS19BP1Q86WX3 136 aaKnown RBP6.79□□□□□ -1.32
ATXN3-219ENST00000553488 LRRC57Q8N9N7 239 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 FBXO15Q8NCQ5 510 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-219ENST00000553488 GSDMBQ8TAX9 411 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 ZCCHC10Q8TBK6 192 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 RND1Q92730 232 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 TM4SF19Q96DZ7 209 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 OR1F2PQ96R84 312 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 MACROD1Q9BQ69 325 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 CDCP1Q9H5V8 836 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 KCNJ16Q9NPI9 418 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 GALPQ9UBC7 116 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 SH2B3Q9UQQ2 575 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 DOCK7Q96N67 2140 aa6.79□□□□□ -1.32
ATXN3-219ENST00000553488 SONP18583 2426 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 HIVEP2P31629 2446 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 KCNE1BA0A087WTH5 132 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ZNF860A6NHJ4 632 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 SAGE2PA6NJ88 616 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 H7BY64 318 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 PROM1O43490 865 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 CDC40O60508 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 IMPA1P29218 277 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 COILP38432 576 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 SKIV2L2P42285 1042 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 HLCSP50747 726 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 ADARP55265 1226 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 RPS15AP62244 130 aaKnown RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 MPP1Q00013 466 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 LTBQ06643 244 aa6.78□□□□□ -1.32
ATXN3-219ENST00000553488 TBX2Q13207 712 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-219ENST00000553488 TSTA3Q13630 321 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms