RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 SMIM10Q96HG1 83 aa16.52■□□□□ 0.24
CD9-211ENST00000546073 PTCHD1Q96NR3 888 aa16.52■□□□□ 0.24
CD9-211ENST00000546073 LYRM4Q9HD34 91 aa16.52■□□□□ 0.24
CD9-211ENST00000546073 LYARQ9NX58 379 aaKnown RBP16.52■□□□□ 0.24
CD9-211ENST00000546073 PPT2Q9UMR5 302 aa16.52■□□□□ 0.24
CD9-211ENST00000546073 KCNMB2Q9Y691 235 aa16.52■□□□□ 0.24
CD9-211ENST00000546073 FRYQ5TBA9 3013 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 NPHS1O60500 1241 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 MYO1DO94832 1006 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 SNUPNO95149 360 aaKnown RBP16.51■□□□□ 0.23
CD9-211ENST00000546073 UMODP07911 640 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 HIST1H1TP22492 207 aaPredicted RBP16.51■□□□□ 0.23
CD9-211ENST00000546073 CPN2P22792 545 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 PPP2R1BP30154 601 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 ALDH3A1P30838 453 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 POLE2P56282 527 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 CSTF3Q12996 717 aaKnown RBP16.51■□□□□ 0.23
CD9-211ENST00000546073 AIMP2Q13155 320 aaKnown RBP16.51■□□□□ 0.23
CD9-211ENST00000546073 SLC13A2Q13183 592 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 SLAMF1Q13291 335 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 LETMD1Q6P1Q0 360 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 APLFQ8IW19 511 aaPredicted RBP16.51■□□□□ 0.23
CD9-211ENST00000546073 ZC3H7AQ8IWR0 971 aaKnown RBP16.51■□□□□ 0.23
CD9-211ENST00000546073 ZNF595Q8IYB9 648 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 ACOT4Q8N9L9 421 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 WDR20Q8TBZ3 569 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 VIPAS39Q9H9C1 493 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 PRDM9Q9NQV7 894 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 RIC8BQ9NVN3 520 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 SLC17A7Q9P2U7 560 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 VPS29Q9UBQ0 182 aa16.51■□□□□ 0.23
CD9-211ENST00000546073 ANKRD11Q6UB99 2663 aaPredicted RBP16.5■□□□□ 0.23
CD9-211ENST00000546073 MAP1BP46821 2468 aaKnown RBP16.5■□□□□ 0.23
CD9-211ENST00000546073 MANBAO00462 879 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 BIRC5O15392 142 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 DYRK3O43781 588 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 TYROBPO43914 113 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 CDC123O75794 336 aaPredicted RBP16.5■□□□□ 0.23
CD9-211ENST00000546073 UROSP10746 265 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
CD9-211ENST00000546073 STX4Q12846 297 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 PCLAFQ15004 111 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 SPDYAQ5MJ70 313 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 CCNYL2Q5T2Q4 361 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 FAM69BQ5VUD6 431 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 NDUFAF7Q7L592 441 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 VN1R5Q7Z5H4 357 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 TRIM42Q8IWZ5 723 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 CA13Q8N1Q1 262 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 EFCAB3Q8N7B9 438 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 OR5T3Q8NGG3 340 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 ADAMTS17Q8TE56 1095 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 RBCK1Q9BYM8 510 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 VN1R1Q9GZP7 353 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 C12orf65Q9H3J6 166 aaKnown RBP16.5■□□□□ 0.23
CD9-211ENST00000546073 GSTO2Q9H4Y5 243 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 TMBIM4Q9HC24 238 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 PRTFDC1Q9NRG1 225 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 TUBD1Q9UJT1 453 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 FBXL4Q9UKA2 621 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 MMACHCQ9Y4U1 282 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 FREM2Q5SZK8 3169 aa16.5■□□□□ 0.23
CD9-211ENST00000546073 CNOT3O75175 753 aaKnown RBP16.49■□□□□ 0.23
CD9-211ENST00000546073 HPP00738 406 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 PDYNP01213 254 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 BPGMP07738 259 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 GRK2P25098 689 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 ITGA3P26006 1051 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 CERS1P27544 350 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 HSD17B7P56937 341 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 OR4D2P58180 307 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 MAGOHP61326 146 aaKnown RBP16.49■□□□□ 0.23
CD9-211ENST00000546073 KCNAB2Q13303 367 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 BIKQ13323 160 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 ABRAXAS2Q15018 415 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 DCAF10Q5QP82 559 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 QSOX2Q6ZRP7 698 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 CPEB2Q7Z5Q1 589 aaKnown RBP16.49■□□□□ 0.23
CD9-211ENST00000546073 PPP1R32Q7Z5V6 425 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 GPR180Q86V85 440 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 LAPTM4BQ86VI4 370 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 ZCCHC7Q8N3Z6 543 aaKnown RBP16.49■□□□□ 0.23
CD9-211ENST00000546073 PLPP5Q8NEB5 264 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 C9orf43Q8TAL5 461 aaPredicted RBP16.49■□□□□ 0.23
CD9-211ENST00000546073 AGAP11Q8TF27 550 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 TM9SF4Q92544 642 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 ZBTB9Q96C00 473 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 LPAR4Q99677 370 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 TUBB6Q9BUF5 446 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 SLC25A23Q9BV35 468 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 GATA5Q9BWX5 397 aaPredicted RBP16.49■□□□□ 0.23
CD9-211ENST00000546073 PRDM7Q9NQW5 492 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 ADAM29Q9UKF5 820 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 FBXW2Q9UKT8 454 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 DAPP1Q9UN19 280 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 HS3ST3B1Q9Y662 390 aa16.49■□□□□ 0.23
CD9-211ENST00000546073 SNRNP200O75643 2136 aaKnown RBP16.49■□□□□ 0.23
CD9-211ENST00000546073 WDR91A4D1P6 747 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms