RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 CHRNB3Q05901 458 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLAMF1Q13291 335 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RUNX3Q13761 415 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PDCD1Q15116 288 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ZIK1Q3SY52 487 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CLLU1Q5K131 121 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 OTUD3Q5T2D3 398 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TSTD2Q5T7W7 516 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLFN12LQ6IEE8 588 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CASC4Q6P4E1 433 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLC27A1Q6PCB7 646 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLC46A3Q7Z3Q1 461 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RABEPKQ7Z6M1 372 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 STK32CQ86UX6 486 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 HIPK1Q86Z02 1210 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SLC22A9Q8IVM8 553 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 MICU2Q8IYU8 434 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 EID3Q8N140 333 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 MIER2Q8N344 545 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FSTL5Q8N475 847 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CHST14Q8NCH0 376 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 OR7G3Q8NG95 312 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 OR5K1Q8NHB7 308 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FRS2Q8WU20 508 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 RLN3Q8WXF3 142 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KIAA1143Q96AT1 154 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 TESCQ96BS2 214 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 REPS1Q96D71 796 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CCDC120Q96HB5 630 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PPP1R36Q96LQ0 422 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 GPR78Q96P69 363 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PEBP4Q96S96 227 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 DCLRE1CQ96SD1 692 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KCNJ15Q99712 375 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 P2RY13Q9BPV8 354 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 FAM83CQ9BQN1 747 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SEMA4CQ9C0C4 833 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 CCDC90BQ9GZT6 254 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 C6orf62Q9GZU0 229 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 DHX35Q9H5Z1 703 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 MAGIXQ9H6Y5 334 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 GORASP2Q9H8Y8 452 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 KMT5AQ9NQR1 393 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 DYRK4Q9NR20 520 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 SDR39U1Q9NRG7 319 aaPredicted RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 GKN1Q9NS71 199 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 UCKL1Q9NWZ5 548 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ING3Q9NXR8 418 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 BFARQ9NZS9 450 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PCOLCE2Q9UKZ9 415 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 MAFFQ9ULX9 164 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 YIPF1Q9Y548 306 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ORC6Q9Y5N6 252 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 OAS3Q9Y6K5 1087 aaKnown RBP4.43□□□□□ -1.7
CNGA1-209ENST00000544810 PLXNB3Q9ULL4 1909 aa4.43□□□□□ -1.7
CNGA1-209ENST00000544810 ASCC3Q8N3C0 2202 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ZCWPW2A0A1B0GU75 182 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 A0A1W2PRG6 482 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CCDC182A6NF36 153 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 OR6C70A6NIJ9 312 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 BCKDKO14874 412 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 B4GALT5O43286 388 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TLX3O43711 291 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PTP4A3O75365 173 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 EEDO75530 441 aaKnown RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CYP7B1O75881 506 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 B3GAT3O94766 335 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 OLFM2O95897 454 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 AHSGP02765 367 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 THP07101 528 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SLC35E2BP0CK96 405 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ERVK-10P10266 1014 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 C6P13671 934 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RHCEP18577 417 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 HDCP19113 662 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TNNI1P19237 187 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 RAB3AP20336 220 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 MYL9P24844 172 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 HRH2P25021 359 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SDC4P31431 198 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 BRCC3P46736 316 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 NPY2RP49146 381 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ACOT2P49753 483 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 POLR2GP62487 172 aaKnown RBP eCLIP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 FLI1Q01543 452 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 LIPEQ05469 1076 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 MBTD1Q05BQ5 628 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SCN1BQ07699 218 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 TIMM50Q3ZCQ8 353 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 PYCR3Q53H96 274 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ANKRD39Q53RE8 183 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 ARMC4Q5T2S8 1044 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CNSTQ6PJW8 725 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 LAYNQ6UX15 382 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 SLC26A9Q7LBE3 791 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 B3GNT8Q7Z7M8 397 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 BRSK2Q8IWQ3 736 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CNTN4Q8IWV2 1026 aa4.42□□□□□ -1.7
CNGA1-209ENST00000544810 DMRTC2Q8IXT2 367 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-209ENST00000544810 CENPLQ8N0S6 344 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms