RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SLC9A5Q14940 896 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 NNATQ16517 81 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 HSDL2Q6YN16 418 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 LRRTM4Q86VH4 590 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 RERGQ96A58 199 aaPredicted RBP15.47■□□□□ 0.07
VARS2-212ENST00000542001 GPR52Q9Y2T5 361 aa15.47■□□□□ 0.07
VARS2-212ENST00000542001 OR52A4PA6NMU1 304 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 CAPN15O75808 1086 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 C6P13671 934 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 CD9P21926 228 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 LHCGRP22888 699 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 HTR1BP28222 390 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 STX4Q12846 297 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 DHCR24Q15392 516 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 LEXMQ3ZCV2 418 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 PLEKHS1Q5SXH7 462 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 LHFPL3Q86UP9 236 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 NUDT13Q86X67 352 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 HOMEZQ8IX15 550 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 GRHL3Q8TE85 626 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 GEMIN6Q8WXD5 167 aaKnown RBP15.46■□□□□ 0.07
VARS2-212ENST00000542001 ERVK13-1Q9NX77 482 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 CNOT11Q9UKZ1 510 aaKnown RBP15.46■□□□□ 0.07
VARS2-212ENST00000542001 NDRG2Q9UN36 371 aaKnown RBP15.46■□□□□ 0.07
VARS2-212ENST00000542001 ZNF30P17039 623 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 PTX3P26022 381 aaPredicted RBP15.46■□□□□ 0.07
VARS2-212ENST00000542001 CSTF2P33240 577 aaKnown RBP eCLIP15.46■□□□□ 0.07
VARS2-212ENST00000542001 RGS1Q08116 209 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 ZNF404Q494X3 552 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 C6orf183Q5T699 404 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 CEP68Q76N32 757 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 SCML4Q8N228 414 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 BPIFB1Q8TDL5 484 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 DOHHQ9BU89 302 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 TMED9Q9BVK6 235 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 DCAF13Q9NV06 445 aaKnown RBP15.46■□□□□ 0.07
VARS2-212ENST00000542001 IRAK3Q9Y616 596 aa15.46■□□□□ 0.07
VARS2-212ENST00000542001 TMEM189-UBE2V1I3L0A0 370 aa15.46■□□□□ 0.06
VARS2-212ENST00000542001 APODP05090 189 aa15.46■□□□□ 0.06
VARS2-212ENST00000542001 PIN1Q13526 163 aaPredicted RBP15.46■□□□□ 0.06
VARS2-212ENST00000542001 SPCS2Q15005 226 aa15.46■□□□□ 0.06
VARS2-212ENST00000542001 CHDHQ8NE62 594 aaPredicted RBP15.46■□□□□ 0.06
VARS2-212ENST00000542001 HMGCLL1Q8TB92 370 aa15.46■□□□□ 0.06
VARS2-212ENST00000542001 GPR151Q8TDV0 419 aa15.46■□□□□ 0.06
VARS2-212ENST00000542001 TAS2R16Q9NYV7 291 aa15.46■□□□□ 0.06
VARS2-212ENST00000542001 LOXHD1Q8IVV2 1947 aa15.46■□□□□ 0.06
VARS2-212ENST00000542001 CENPXA8MT69 81 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 A8MU76 341 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 ACOX3O15254 700 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 CDC123O75794 336 aaPredicted RBP15.45■□□□□ 0.06
VARS2-212ENST00000542001 CDRT1O95170 752 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 CPN2P22792 545 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 PGDP52209 483 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 PLET1Q6UQ28 207 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 OXR1Q8N573 874 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 OR8K5Q8NH50 307 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 ZFP90Q8TF47 636 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 C1QTNF7Q9BXJ2 289 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 YTHDF1Q9BYJ9 559 aaKnown RBP15.45■□□□□ 0.06
VARS2-212ENST00000542001 TUBA8Q9NY65 449 aaPredicted RBP15.45■□□□□ 0.06
VARS2-212ENST00000542001 TYRP1P17643 537 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 GADD45AP24522 165 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 TCEAL5Q5H9L2 206 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 CD300LGQ6UXG3 332 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 FAM98AQ8NCA5 519 aaKnown RBP15.45■□□□□ 0.06
VARS2-212ENST00000542001 ZNF675Q8TD23 568 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 ZFP3Q96NJ6 502 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 HEBP1Q9NRV9 189 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 HCN4Q9Y3Q4 1203 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 HAT1O14929 419 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 ALPLP05186 524 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 ALAS2P22557 587 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 PNLIPRP1P54315 467 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 EMX1Q04741 257 aaPredicted RBP15.45■□□□□ 0.06
VARS2-212ENST00000542001 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.45■□□□□ 0.06
VARS2-212ENST00000542001 SLC39A11Q8N1S5 342 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 DEFB119Q8N690 84 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 ZNF548Q8NEK5 533 aaPredicted RBP15.45■□□□□ 0.06
VARS2-212ENST00000542001 OR5D16Q8NGK9 328 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 CITED4Q96RK1 184 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 SRMSQ9H3Y6 488 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 ZNF225Q9UK10 706 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 CEP350Q5VT06 3117 aa15.45■□□□□ 0.06
VARS2-212ENST00000542001 A0A1W2PPK0 400 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 SH3PXD2BA1X283 911 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 M0R3H8 397 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 PIM1P11309 404 aaPredicted RBP15.44■□□□□ 0.06
VARS2-212ENST00000542001 AOAHP28039 575 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 MINDY4Q4G0A6 757 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 ASB18Q6ZVZ8 466 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 ZNF761Q86XN6 746 aaPredicted RBP15.44■□□□□ 0.06
VARS2-212ENST00000542001 OVCA2Q8WZ82 227 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 HERVK_113Q902F9 699 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 KXD1Q9BQD3 176 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 FABP12A6NFH5 140 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 HCN1O60741 890 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 ERVK-21P61565 698 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 COQ5Q5HYK3 327 aa15.44■□□□□ 0.06
VARS2-212ENST00000542001 REEP3Q6NUK4 255 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms