RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 BIRC7Q96CA5 298 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 S100A16Q96FQ6 103 aaKnown RBP17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 TM9SF3Q9HD45 589 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 SUSD2Q9UGT4 822 aa17.52■□□□□ 0.4
SFSWAP-203ENST00000535236 PROM1O43490 865 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 CDRT1O95170 752 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 GSRP00390 522 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 SPARCP09486 303 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 SLC15A1P46059 708 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 FOXK1P85037 733 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 OGDHQ02218 1023 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 FAM182AQ5T1J6 154 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 TMEM74Q96NL1 305 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 FUZQ9BT04 418 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 NOP16Q9Y3C1 178 aaKnown RBP17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 C11orf98E9PRG8 122 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 F8A1P23610 371 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 GABRA3P34903 492 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 HNF1BP35680 557 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 DCAF12L1Q5VU92 463 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 SLC39A4Q6P5W5 647 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 OR10Q1Q8NGQ4 319 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 TGM7Q96PF1 710 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 TIGARQ9NQ88 270 aa17.52■□□□□ 0.39
SFSWAP-203ENST00000535236 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 A0A1B0GVC2 190 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 MAN2B1O00754 1011 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 SCO2O43819 266 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 CHRM1P11229 460 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 LMAN2Q12907 356 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 ZNF678Q5SXM1 525 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 NCEH1Q6PIU2 408 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 TREML1Q86YW5 311 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 CCDC116Q8IYX3 515 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 LRIG1Q96JA1 1093 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 TOR3AQ9H497 397 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 UCKL1Q9NWZ5 548 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 PPP4R1LQ9P1A2 415 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 TCEAL3Q969E4 200 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 DNAJB4Q9UDY4 337 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 FXYD6-FXYD2A0A087WZ82 144 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 PLD2O14939 933 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 PTNP21246 168 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 PLCXD2Q0VAA5 305 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 SGCAQ16586 387 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 LIPJQ5W064 366 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 C14orf80Q86SX3 495 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 SMG8Q8ND04 991 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 OR4K1Q8NGD4 311 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 GLYATL1Q969I3 302 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 HERC2P3Q9BVR0 1158 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 FXYD6Q9H0Q3 95 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 NUDT15Q9NV35 164 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 PADI2Q9Y2J8 665 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 TEX264Q9Y6I9 313 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 PIRO00625 290 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 GJB5O95377 273 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 EPOP01588 193 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 C10orf62Q5T681 223 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 ZER1Q7Z7L7 766 aa17.51■□□□□ 0.39
SFSWAP-203ENST00000535236 CIB4A0PJX0 185 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 MAN2A2P49641 1150 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 TPTEP56180 551 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 CTBP2P56545 445 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 EXOSC1Q9Y3B2 195 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 NPPAP01160 153 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 S1PR1P21453 382 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 TUBA8Q9NY65 449 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 H3BUI4 141 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 M0R2N6 131 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 SMAD9O15198 467 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 ENDOUP21128 410 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 C1orf61Q13536 156 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 SWT1Q5T5J6 900 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 RPS27LQ71UM5 84 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 OR9I1Q8NGQ6 314 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 AKAP1Q92667 903 aaKnown RBP eCLIP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 OR10A4Q9H209 315 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 ZBTB26Q9HCK0 441 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 SNAI1O95863 264 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 CSTAP01040 98 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 C1GALT1C1LP0DN25 315 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 OR4D2P58180 307 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 GPX6P59796 221 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 ST3GAL4Q11206 333 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 UPP1Q16831 310 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 MINDY2Q8NBR6 621 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 SCAMP4Q969E2 229 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 EHD1Q9H4M9 534 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 DNAJC27Q9NZQ0 273 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 SLC16A5O15375 505 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 JUNDP17535 347 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 STK19P49842 368 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 MLLT1Q03111 559 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 ECH1Q13011 328 aa17.5■□□□□ 0.39
SFSWAP-203ENST00000535236 EIF2S3LQ2VIR3 472 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms