RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NOXRED1Q6NXP6 359 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 RHEBL1Q8TAI7 183 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.17□□□□□ -1.15e-8■■■■□ 23.2
CTNND1-227ENST00000530748 SIGLEC10Q96LC7 697 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 C17orf62Q9BQA9 187 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ARHGAP39Q9C0H5 1083 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 IL23AQ9NPF7 189 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 NKX1-2Q9UD57 310 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 HSD3B1P14060 373 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 HSD3B2P26439 372 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 RPL19P84098 196 aaKnown RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 TECRLQ5HYJ1 363 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF773Q6PK81 442 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 JAGN1Q8N5M9 183 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF565Q8N9K5 539 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 WDR92Q96MX6 357 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 HHATLQ9HCP6 504 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 F8A1P23610 371 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 CAPZA1P52907 286 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 MEF2AQ02078 507 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 MEP1AQ16819 746 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 SPIN3Q5JUX0 258 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 TXNDC5Q8NBS9 432 aaKnown RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 PSD4Q8NDX1 1056 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 TSPEARQ8WU66 669 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 IGSF8Q969P0 613 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 TMEM203Q969S6 136 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF317Q96PQ6 595 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 SMURF1Q9HCE7 757 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 GPRC5BQ9NZH0 403 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 RHCGQ9UBD6 479 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 RNF6Q9Y252 685 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 DLGAP4Q9Y2H0 992 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 OR6C74A6NCV1 312 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 FAM72CH0Y354 149 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ABCB7O75027 752 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF821O75541 412 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 FHP07954 510 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ITGA5P08648 1049 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 OR12D1P0DN82 309 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 FAM72AQ5TYM5 149 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 FAM72DQ6L9T8 149 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 FAM72BQ86X60 149 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 ZSWIM9Q86XI8 627 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 NUP43Q8NFH3 380 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 GLYATL1Q969I3 302 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 BARD1Q99728 777 aaKnown RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 POLDIP3Q9BY77 421 aaKnown RBP8.17□□□□□ -1.1
CTNND1-227ENST00000530748 SEC14L4Q9UDX3 406 aa8.17□□□□□ -1.1
CTNND1-227ENST00000530748 KLHL33A6NCF5 533 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 EMC8O43402 210 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 MAFKO60675 156 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 SOX14O95416 240 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 TYRP1P17643 537 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 GLDCP23378 1020 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 RHDQ02161 417 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 OR4C11Q6IEV9 310 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 GPRIN1Q7Z2K8 1008 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 SIAH1Q8IUQ4 282 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 METTL27Q8N6F8 245 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 ZSCAN4Q8NAM6 433 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 SHKBP1Q8TBC3 707 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 S100A16Q96FQ6 103 aaKnown RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 PIP5K1AQ99755 562 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 RMI1Q9H9A7 625 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 E7EQ34 232 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 TSPAN9O75954 239 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 IL3P08700 152 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 CKMT2P17540 419 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 FDXRP22570 491 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 PROZP22891 400 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 EDNRBP24530 442 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 STOMP27105 288 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 SUOXP51687 545 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 S100A10P60903 97 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 CCSAPQ6IQ19 270 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 PLD6Q8N2A8 252 aaKnown RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 UMODL1-AS1Q8N2C9 162 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 LNX2Q8N448 690 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 ADAMTS18Q8TE60 1221 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 MMABQ96EY8 250 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 FBXL20Q96IG2 436 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 RDH12Q96NR8 316 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 HRASLS2Q9NWW9 162 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 WDR45Q9Y484 360 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 C1orf226A1L170 272 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 TTC34A8MYJ7 566 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 SCAMP2O15127 329 aaKnown RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 INMTO95050 263 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 RASAL1O95294 804 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 JUPP14923 745 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 EPCAMP16422 314 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 TIA1P31483 386 aaKnown RBP eCLIP8.16□□□□□ -1.12e-8■■■■□ 21.1
CTNND1-227ENST00000530748 GNG2P59768 71 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 POU4F2Q12837 409 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 IRF5Q13568 498 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF267Q14586 743 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-227ENST00000530748 RAB39AQ14964 217 aa8.16□□□□□ -1.1
CTNND1-227ENST00000530748 TREML1Q86YW5 311 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms