RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 NEURL2Q9BR09 285 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 KLF16Q9BXK1 252 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 RACGAP1Q9H0H5 632 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 SLC6A17Q9H1V8 727 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 IKZF5Q9H5V7 419 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 ACOT13Q9NPJ3 140 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 SERHLQ9NQF3 203 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 AASDHPPTQ9NRN7 309 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 PDP1Q9P0J1 537 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 ERVK-18Q9QC07 812 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 VPS51Q9UID3 782 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 BTNL2Q9UIR0 455 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 ZNF229Q9UJW7 825 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 NDRG4Q9ULP0 352 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 VPS4AQ9UN37 437 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 WASF3Q9UPY6 502 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 POFUT2Q9Y2G5 429 aa8.3□□□□□ -1.08
CTNNA1-223ENST00000520520 KCNE1BA0A087WTH5 132 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 TMEM247A6NEH6 219 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 EFCAB9A8MZ26 197 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CLIC1O00299 241 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SUV39H1O43463 412 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 MPZL2O60487 215 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 AP2A2O94973 939 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 MED26O95402 600 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 IFNA14P01570 189 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 APOA1P02647 267 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SEMG1P04279 462 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ALPIP09923 528 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 MYCLP1P12525 358 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ANXA8P13928 327 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 HOXB2P14652 356 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 JUPP14923 745 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CD36P16671 472 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 GPX2P18283 190 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 POLR2EP19388 210 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 FMO3P31513 532 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 KDELR2P33947 212 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 PCGF2P35227 344 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SOX6P35712 828 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 HNF4AP41235 474 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CSKP41240 450 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 HALP42357 657 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SLC6A12P48065 614 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 PCYT1AP49585 367 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SNRPD1P62314 119 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SLC7A9P82251 487 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ZNF45Q02386 682 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CHRNA6Q15825 494 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CPSF6Q16630 551 aaKnown RBP eCLIP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CYP2A13Q16696 494 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 NDUFA5Q16718 116 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 C18orf21Q32NC0 220 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ZNF404Q494X3 552 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 GTDC1Q4AE62 458 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 MLIPQ5VWP3 458 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 NOXRED1Q6NXP6 359 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 FAHD1Q6P587 224 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 KIAA1324Q6UXG2 1013 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 LINGO4Q6UY18 593 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 GALNT5Q7Z7M9 940 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 TRIM69Q86WT6 500 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CACUL1Q86Y37 369 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ARMC8Q8IUR7 673 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 BBS7Q8IWZ6 715 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CHPFQ8IZ52 775 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 MFSD4AQ8N468 514 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 KIAA1958Q8N8K9 716 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ZNF557Q8N988 423 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 OR8J2Q8NGG1 315 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CLHC1Q8NHS4 586 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 LKAAEAR1Q8TD35 194 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SKA2Q8WVK7 121 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 PIH1D2Q8WWB5 315 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 WBP2Q969T9 261 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CRELD1Q96HD1 420 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 HSPA12BQ96MM6 686 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 TSSK3Q96PN8 268 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CSF3RQ99062 836 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SPSB2Q99619 263 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 SLC12A9Q9BXP2 914 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 RUBCNLQ9H714 662 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ZNF556Q9HAH1 456 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 BRF2Q9HAW0 419 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 MOV10Q9HCE1 1003 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CD93Q9NPY3 652 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 PLCXD1Q9NUJ7 323 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 THUMPD1Q9NXG2 353 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 DEC1Q9P2X7 70 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 ZNF282Q9UDV7 671 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 EVLQ9UI08 416 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 DOLKQ9UPQ8 538 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 PADI2Q9Y2J8 665 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 UGT2A1Q9Y4X1 527 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 PCDHGB3Q9Y5G1 929 aa8.29□□□□□ -1.08
CTNNA1-223ENST00000520520 CORINQ9Y5Q5 1042 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms