RNA–Protein interactions for RNA: ENST00000520467.5

SCUBE2-207, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCUBE2, Length 3,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-207ENST00000520467 SDC2P34741 201 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 MLLT3P42568 568 aaPredicted RBP15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 CDH4P55283 916 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 XKR6Q5GH73 641 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 C17orf99Q6UX52 265 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 ANKS3Q6ZW76 656 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 WDR53Q7Z5U6 358 aaPredicted RBP15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 TRIM69Q86WT6 500 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 C1orf52Q8N6N3 182 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 VPS37AQ8NEZ2 397 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 C1GALT1C1Q96EU7 318 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 MYO19Q96H55 970 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 STUB1Q9UNE7 303 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 HCN4Q9Y3Q4 1203 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 SCN10AQ9Y5Y9 1956 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 TRPM7Q96QT4 1865 aa15.73■□□□□ 0.11
SCUBE2-207ENST00000520467 FAM240BA0A1B0GVZ2 78 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 MGAT4DA6NG13 374 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 ZNF670-ZNF695F2Z2N8 137 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 GAPDHSO14556 408 aaPredicted RBP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 HBQ1P09105 142 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 ACRV1P26436 265 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 INPP1P49441 399 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 ALDH6A1Q02252 535 aaKnown RBP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 ABRQ12979 859 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 SCARB2Q14108 478 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 USP30Q70CQ3 517 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 TIGD4Q8IY51 512 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 RDH10Q8IZV5 341 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 SPERTQ8NA61 448 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 OR4M1Q8NGD0 313 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 PCNPQ8WW12 178 aaKnown RBP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 VPS29Q9UBQ0 182 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 SEC14L4Q9UDX3 406 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 SNX11Q9Y5W9 270 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 CCDC88CQ9P219 2028 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 PRAMEF33A0A0G2JMD5 474 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 E9PQ18 207 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 PRAMEF10O60809 474 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 ANXA4P09525 319 aaPredicted RBP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 TRAPPC2P0DI81 140 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 TRAPPC2BP0DI82 140 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 SOAT1P35610 550 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 GZMKP49863 264 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 CRISP1P54107 249 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 DUSP4Q13115 394 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 CDH18Q13634 790 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 FRMPD2BQ6IN97 320 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 NCEH1Q6PIU2 408 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 NPAS3Q8IXF0 933 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 OR4C15Q8NGM1 316 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 UBTD2Q8WUN7 234 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 MED8Q96G25 268 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 NMNAT1Q9HAN9 279 aaPredicted RBP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 TLR4O00206 839 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 IGLV3-27P01718 113 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 SLC2A2P11168 524 aaPredicted RBP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 RPS3P23396 243 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 DDI2Q5TDH0 399 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 LCN1P1Q5VSP4 162 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 TSPAN33Q86UF1 283 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 FAM20CQ8IXL6 584 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 KLHL6Q8WZ60 621 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 PHF21AQ96BD5 680 aa15.72■□□□□ 0.11
SCUBE2-207ENST00000520467 MTX2O75431 263 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 PSIP1O75475 530 aaKnown RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 BPIP17213 487 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 AOAHP28039 575 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 CCR7P32248 378 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 PCGF2P35227 344 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 MAP2K3P46734 347 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 C19orf57Q0VDD7 668 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 MRPL28Q13084 256 aaKnown RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 KCNA10Q16322 511 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 WSCD2Q2TBF2 565 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 GLYR1Q49A26 553 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 C19orf48Q6RUI8 117 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 VRK3Q8IV63 474 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 TCEANCQ8N8B7 351 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 HJURPQ8NCD3 748 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 FAM193BQ96PV7 902 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 GALNT9Q9HCQ5 603 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 ACER3Q9NUN7 267 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 ING3Q9NXR8 418 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 PCDH10Q9P2E7 1040 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 SLC23A1Q9UHI7 598 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 TMCC3Q9ULS5 477 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 SPIN1Q9Y657 262 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 KCNE1BA0A087WTH5 132 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 LOC102723532A0A0G2JNH3 316 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 H3BNC9 293 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 CA12O43570 354 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 CSTF2P33240 577 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 C1DQ13901 141 aaKnown RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 XKRXQ6PP77 449 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 CCDC149Q6ZUS6 474 aa15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 BPHLQ86WA6 291 aaPredicted RBP15.71■□□□□ 0.11
SCUBE2-207ENST00000520467 TMC8Q8IU68 726 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms