RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LNX2Q8N448 690 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 OR4K1Q8NGD4 311 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 OR10Q1Q8NGQ4 319 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 RAET1EQ8TD07 263 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 LKAAEAR1Q8TD35 194 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 SEMA4DQ92854 862 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 RPL3LQ92901 407 aaKnown RBP3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 GLYATL1Q969I3 302 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 TMEM18Q96B42 140 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 REPS1Q96D71 796 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 SENP5Q96HI0 755 aaPredicted RBP3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 IGSF21Q96ID5 467 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 PRRC1Q96M27 445 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 VSTM2LQ96N03 204 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 TSNARE1Q96NA8 513 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 CASD1Q96PB1 797 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 KCNS3Q9BQ31 491 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 C19orf43Q9BQ61 176 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 BTBD10Q9BSF8 475 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 FUNDC2Q9BWH2 189 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 SF3B5Q9BWJ5 86 aaKnown RBP3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 SPATA16Q9BXB7 569 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 LRRC2Q9BYS8 371 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 TRIM9Q9C026 710 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 STRADBQ9C0K7 418 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 KLC2Q9H0B6 622 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 GANQ9H2C0 597 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 GEMIN7Q9H840 131 aaKnown RBP3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 C10orf88Q9H8K7 445 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 SEC61A2Q9H9S3 476 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 UBTD1Q9HAC8 227 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 RAB18Q9NP72 206 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 CD320Q9NPF0 282 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 CNGB3Q9NQW8 809 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 C1RLQ9NZP8 487 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 HACD3Q9P035 362 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 TESQ9UGI8 421 aaKnown RBP3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 UTS2RQ9UKP6 389 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 LAMP3Q9UQV4 416 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 ERVK-19Q9WJR5 959 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 NCKAP1Q9Y2A7 1128 aa3.69□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TRAV25A0A0B4J276 109 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 A0A1B0GVL5 298 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TCRBV5S1A1TA0A578 114 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SLC22A23A1A5C7 686 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 GAGE12BA1L429 117 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CCDC162PA2VCL2 907 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 GAGE12HA6NDE8 117 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 MARCH11A6NNE9 402 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 GABRR3A8MPY1 467 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 RSPH10B2B2RC85 870 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 E5RGE8 158 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 RHODO00212 210 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 LCE2BO14633 110 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF197O14709 1029 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SYT7O43581 403 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CHMP2AO43633 222 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 B4GALT3O60512 393 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 JAK2O60674 1132 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 LPXNO60711 386 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 GRAP2O75791 330 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TTLL1O95922 423 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 LDLRP01130 860 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 APOA1P02647 267 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CHRNA1P02708 482 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 MMP3P08254 477 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 GSTA2P09210 222 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CLTAP09496 248 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 HIST1H2AGP0C0S8 130 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 RSPH10BP0C881 870 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 UMPSP11172 480 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 DBTP11182 482 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CYP19A1P11511 503 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 GJB2P29033 226 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 HOXA7P31268 230 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TNFSF8P32971 234 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 MAGEA8P43361 318 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CTSCP53634 463 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CDH4P55283 916 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TAS2R38P59533 333 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 PPP2CBP62714 309 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 PPP2CAP67775 309 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 RPP38P78345 283 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 BDH1Q02338 343 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 EEF1A2Q05639 463 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 HYAL1Q12794 435 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF177Q13360 481 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 LAMB3Q13751 1172 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ENPP2Q13822 863 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 EXOSC2Q13868 293 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ELAVL3Q14576 367 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ANGPT1Q15389 498 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TGFBIQ15582 683 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 KCNMB1Q16558 191 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 AANATQ16613 207 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF829Q3KNS6 432 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF542PQ5EBM4 170 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 XKR7Q5GH72 579 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ARMCX4Q5H9R4 360 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms