RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PSMC5P62195 406 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 POLR2LP62875 67 aaKnown RBP3.85□□□□□ -1.79
HTT-210ENST00000512909 DLK1P80370 383 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 PRKCEQ02156 737 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 ZNF273Q14593 569 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 GPNMBQ14956 572 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 GTDC1Q4AE62 458 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 EPC2Q52LR7 807 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 XKR3Q5GH77 459 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 HECTD3Q5T447 861 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 CYP4A22Q5TCH4 519 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 SHEQ5VZ18 495 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 CAVIN1Q6NZI2 390 aaKnown RBP3.85□□□□□ -1.79
HTT-210ENST00000512909 RBMS3Q6XE24 437 aaKnown RBP3.85□□□□□ -1.79
HTT-210ENST00000512909 MSANTD1Q6ZTZ1 278 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 CATSPER4Q7RTX7 472 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 RTN4RL2Q86UN3 420 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 SIX6OS1Q8N1H7 587 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 CCDC63Q8NA47 563 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 KBTBD8Q8NFY9 601 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 PHLDA1Q8WV24 401 aaPredicted RBP3.85□□□□□ -1.79
HTT-210ENST00000512909 SLC47A1Q96FL8 570 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 FAM20AQ96MK3 541 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 JPH2Q9BR39 696 aaPredicted RBP3.85□□□□□ -1.79
HTT-210ENST00000512909 KATNB1Q9BVA0 655 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 FTHL17Q9BXU8 183 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 POLD4Q9HCU8 107 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 A4GALTQ9NPC4 353 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 GSN-AS1Q9NRJ2 163 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 GMEB2Q9UKD1 530 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 SMC3Q9UQE7 1217 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 CHKBQ9Y259 395 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 KIF3AQ9Y496 699 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 LIPGQ9Y5X9 500 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 FRMPD4Q14CM0 1322 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 PLXNA1Q9UIW2 1896 aa3.85□□□□□ -1.79
HTT-210ENST00000512909 IGKV6D-21A0A0A0MT36 114 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 LOC101059948A0A1B0GTJ6 334 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 MBLAC1A4D2B0 266 aaPredicted RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 C5orf60A6NFR6 353 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 EPOPA6NHQ4 379 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 ENO4A6NNW6 628 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 NEMFO60524 1076 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 MMP1P03956 469 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 GCFC2P16383 781 aaKnown RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 EFNA1P20827 205 aaPredicted RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 GJB2P29033 226 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 CEACAM8P31997 349 aaPredicted RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 CCT6AP40227 531 aaKnown RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 DLX5P56178 289 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 HMGN5P82970 282 aaKnown RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 MGAT3Q09327 533 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 GPR17Q13304 367 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 ITPRIPL2Q3MIP1 535 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 PHLDA2Q53GA4 152 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 FAM76BQ5HYJ3 339 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 WDR38Q5JTN6 314 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 SLC35D3Q5M8T2 416 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 TWF2Q6IBS0 349 aaKnown RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 CASC4Q6P4E1 433 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 SLC24A5Q71RS6 500 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 ANO5Q75V66 913 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 CCDC91Q7Z6B0 441 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 TRPT1Q86TN4 253 aaKnown RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 TIGD4Q8IY51 512 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 ZNF383Q8NA42 475 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 OR11H4Q8NGC9 324 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 VANGL1Q8TAA9 524 aaPredicted RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 ERMNQ8TAM6 284 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 TCP11Q8WWU5 503 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 TSACCQ96A04 125 aaPredicted RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 BSCL2Q96G97 398 aaPredicted RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 AK8Q96MA6 479 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 MUS81Q96NY9 551 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 PLIN2Q99541 437 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 LLPHQ9BRT6 129 aaKnown RBP3.84□□□□□ -1.79
HTT-210ENST00000512909 INPP5KQ9BT40 448 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 RGS18Q9NS28 235 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 THEGQ9P2T0 379 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 LRWD1Q9UFC0 647 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 STUB1Q9UNE7 303 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 ITM2BQ9Y287 266 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 MTCH2Q9Y6C9 303 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 CNTNAP2Q9UHC6 1331 aa3.84□□□□□ -1.79
HTT-210ENST00000512909 VPS37CA5D8V6 355 aaPredicted RBP3.83□□□□□ -1.8
HTT-210ENST00000512909 ARHGEF35A5YM69 484 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 TMEM221A6NGB7 291 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 LRRIQ4A6NIV6 560 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CCDC169A6NNP5 214 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 PMS2P5A8MQ11 134 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 BLOC1S5-TXNDC5H3BN57 136 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CCDC188H7C350 402 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 ATP6V0E1O15342 81 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 STX6O43752 255 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 EDIL3O43854 480 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 OR10H2O60403 315 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CRCPO75575 148 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 ERLIN2O94905 339 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 SLITRK3O94933 977 aa3.83□□□□□ -1.8
HTT-210ENST00000512909 CXCL14O95715 111 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms